Gene Shewmr7_2304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2304 
Symbol 
ID4256475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2733355 
End bp2734065 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content43% 
IMG OID638122974 
Productrespiratory nitrate reductase chaperone NarJ 
Protein accessionYP_738349 
Protein GI114047799 
COG category[C] Energy production and conversion 
COG ID[COG2180] Nitrate reductase delta subunit 
TIGRFAM ID[TIGR00684] nitrate reductase molybdenum cofactor assembly chaperone 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.880843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0595818 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCAC TCAGGTTAAT AGCCCTATTG CTAGATTATC CCGAACAGGA GGTTTGGGAT 
AATGCACAGG AACTAAACCA TCTAATAAAA CAGTGTGCGG AACTAAACGA ATACCAAAAA
GAACGTATTA ATCAATTTAT TGAACAAATG ACTCAAACTC CTTTAATGGA TTTACAGGCG
CAATATGGTG ATTTGTTTGA GCGTGGTCGT TCTTTATCAT TATTACTATT TGAACACGTC
CACGGTGAAT CCCGTGACCG TGGACAGGCA ATGATTGATT TACTCAACCA ATATAATGCA
GCAGGAATGG TATTAACGGC TAAACAACTG CCCGACTATT TGCCAACCTA CCTCGAATAC
TTGTCGCAAT TGACAGTGTA CGAGTCAATA AGCGGCTTAA AGGATGTCGC CCCAATTCTC
GCGCTTCTCA AAGAGCGACT GAGTCAACGG CAGAGCTACT ACAGTAATTT ATTGCAGGTA
TTAATCGAGC AATCTGGGGA GAAAATTGCA CAGGAAAAAC TGGCCGAGAC GGTGGCAAAT
GAAGCCAAAG ATGACACACC GCAAGCACTC GATGCGGTGT GGGAAGAAGA GCAAATAAAG
TTCTTGGGCG ATGAGGGATG CGCCTCAGTA CAACAAACTC TCCATCAAAA ACGATTTGCT
CACGCCGTTG TTCCGCAATA TCTCGACACT AAAGCATTAA ACGGAGCGTA A
 
Protein sequence
MTSLRLIALL LDYPEQEVWD NAQELNHLIK QCAELNEYQK ERINQFIEQM TQTPLMDLQA 
QYGDLFERGR SLSLLLFEHV HGESRDRGQA MIDLLNQYNA AGMVLTAKQL PDYLPTYLEY
LSQLTVYESI SGLKDVAPIL ALLKERLSQR QSYYSNLLQV LIEQSGEKIA QEKLAETVAN
EAKDDTPQAL DAVWEEEQIK FLGDEGCASV QQTLHQKRFA HAVVPQYLDT KALNGA