Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2281 |
Symbol | |
ID | 4257131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2702817 |
End bp | 2704016 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638122951 |
Product | cystathionine beta-lyase |
Protein accession | YP_738326 |
Protein GI | 114047776 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGATA AACATCAGCT AGCCACCCAA ATCGTCAGCG TCGGTCGAGA TAAAAAATGG ACCAAGGGCG TGATTAACCC GCCCGTATTT CGCGCATCGA CTATCGTCTT CGACACAATG GAAGATATGC GTCATGCCGC CAAAAACAAA ACCAATGGCG AAATGTTTTA TGGCCGCCGT GGCACCCCAA CCCATTTTGC GTTTCAGGCT GCGATCAGTG AGCTCGAAGG TGGCGCAGGT ACGGCGCTGT ATCCCTCAGG TGCAGCGGCG ATTAGCGCGG CTTTGTTATC GTTTTTGCAG GCGGGCGATC ACCTGCTGAT GGTCGACAGT GTGTACGAGC CAACCCGCGA TCTCTGTAGC CATATTCTGG CGGGCTTTAA TATTGAGACC ACCTATTACG ATCCCCTGAT TGGTGAAGGT ATTCGCGAGC TTATCCGCCC CAATACTAAG GTGCTGTTTT TGGAGTCTCC CGGCTCCATC ACCATGGAAG TGCAAGACGT CCCGACCCTA TGCCGTATCG CCCATGAACA TGGATTAGTG ACCATTCTCG ACAACACTTG GGCCTCGCCA ATCAATAGCA AGCCCTTCGA GATGGGTGTC GATGTGTCGA TTCAAGCTGC GACCAAATAT ATCGTCGGTC ACTCTGATGT GATGATTGGC ACCGCGACCG CTAACGAAAA GCACTGGCCG CAGCTGCGTG AACGCAGTTA TTTATTGGGG CAAACGACTT CTCCCGATGA TGTGTATCTC GCCACGCGCG GATTACGCAC CCTAGGCGTG CGCATGGCGC AGCATGAGAA AAATGCCCTT AAAGTGGCAA ACTGGTTGAA AACTCGCCCC GAGGTTGACC ATTTACGTCA CCCCGCCTTT GATACCTGCC CAGGACATGA GTTCTTTAAA CGCGACTTTA GCGCCGCCAA CGGTCTGTTC TCCTTCGTGT TAAAGCAAGG GGATCAGGAG GCGGTGACCG CGCTCGTTGA AAATATGCAA CATTTTAAAA TGGGCTTTTC TTGGGGCGGT TATGAGAGTC TGATCCTAGG AATTTTCGGG ATTGAAAAAA TCCGCAGTGC TACTCAGTGG GATGCAAGCA AGCCGTTGAT CCGTGTGCAT ATTGGCCTCG AAGATCCCGA TGATTTAATT GCCGATCTCA GCGCAGGCTT CGATCGCTTT AATGCCGTAC TCGCAGCCAA GACTAAATAA
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Protein sequence | MTDKHQLATQ IVSVGRDKKW TKGVINPPVF RASTIVFDTM EDMRHAAKNK TNGEMFYGRR GTPTHFAFQA AISELEGGAG TALYPSGAAA ISAALLSFLQ AGDHLLMVDS VYEPTRDLCS HILAGFNIET TYYDPLIGEG IRELIRPNTK VLFLESPGSI TMEVQDVPTL CRIAHEHGLV TILDNTWASP INSKPFEMGV DVSIQAATKY IVGHSDVMIG TATANEKHWP QLRERSYLLG QTTSPDDVYL ATRGLRTLGV RMAQHEKNAL KVANWLKTRP EVDHLRHPAF DTCPGHEFFK RDFSAANGLF SFVLKQGDQE AVTALVENMQ HFKMGFSWGG YESLILGIFG IEKIRSATQW DASKPLIRVH IGLEDPDDLI ADLSAGFDRF NAVLAAKTK
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