Gene Shewmr7_2255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2255 
Symbol 
ID4255180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2675000 
End bp2675866 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content49% 
IMG OID638122925 
Productalpha/beta hydrolase fold 
Protein accessionYP_738300 
Protein GI114047750 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.170585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCAAT CTTTCGCCCC CAAAAATCAA GTCGAGTTTG TGTTACCCCA TATCAAGCTG 
AGTGGTCGAT TATGGGGGGC GAAAGATAAA CCGTTATTAC TCGCGTTGCA TGGTTGGTTA
GACAATGCGA ACAGTTTTGA GCCACTAGCT GAGTATTTGC CTCATTATCA GATACTTGCC
ATAGATTGGC CCGGTCATGG CTTTTCTGCG CATCGGCCGG GGCATTATCC GTTGCATTGG
ATTGACTATT TATACGATCT CGATGCGTTA CTGGCGATGT TGCCGCAAAA GCCGTTGGCC
ATTATCGGAC ATTCGTTAGG GGGCATTATT GCCTCCGCGT ATACCGCAAC CTTTCCTGAA
AAGGTTAACA AACTGATTTT GATTGAGGCG TTAAGCCCAC TATTTGAGTC GCCAACTCAG
GCGAAAACGC GGCTGCGAAA GAGTTTTTAT CAGCACGAGA AGTTTTTAGC GCAAAAGCAT
AAACAGCTAA AAGTCTACGA CAACATGGAC ACGGCAGTAA AAGCCAGAGT GCACTTAACT
GGGCTGGCGG AGCCTTGGTG CCGCTTGTTA CTCGAGCGCA ATATGCAACC TACCACCGAT
GGTGTTGCCT GGCGCAGTGA TCCAAGATTA AGGCTCGACT CGCCAATGCG ACTTACCTTT
GAGCAGGTCG ATGCATTGAT GCAGCACATC TCTGTCTCGA CCCTATTGAT TTGCGGCAAA
CAGGGCTTTA GCCAGTTGCA GTCGGCACTG CCTAAGGCGA GGAAATGGTT CACACATTTG
TCTGAACATA TGCTCGAGGG CGATCACCAT GTGCATATGG ATAACGCCAA AGGGGTTGCA
CACTTGATCC AGCAGTTTGT CGAATAA
 
Protein sequence
MWQSFAPKNQ VEFVLPHIKL SGRLWGAKDK PLLLALHGWL DNANSFEPLA EYLPHYQILA 
IDWPGHGFSA HRPGHYPLHW IDYLYDLDAL LAMLPQKPLA IIGHSLGGII ASAYTATFPE
KVNKLILIEA LSPLFESPTQ AKTRLRKSFY QHEKFLAQKH KQLKVYDNMD TAVKARVHLT
GLAEPWCRLL LERNMQPTTD GVAWRSDPRL RLDSPMRLTF EQVDALMQHI SVSTLLICGK
QGFSQLQSAL PKARKWFTHL SEHMLEGDHH VHMDNAKGVA HLIQQFVE