| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2250 |
|---|
| Symbol | minC |
|---|
| ID | 4255175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 2669996 |
|---|
| End bp | 2670661 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638122920 |
|---|
| Product | septum formation inhibitor |
|---|
| Protein accession | YP_738295 |
|---|
| Protein GI | 114047745 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0850] Septum formation inhibitor |
|---|
| TIGRFAM ID | [TIGR01222] septum site-determining protein MinC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000125523 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.706037 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAC CTAGCTTAGA GTTAAAAGGC GCTTCTTTTA CTCTTTCAGT GCTTCATATC
AATAGCAGCG ACTTAAATGC TGTCATGGCT GAATTAGATA GCAAATTGGC ACAAGCCCCT
CAATTTTTTC TGGGTGCCCC CTTAGTCGTC AACCTCAGCG CCATCCAAGA TAACGATTTC
AATTTACATG GCTTAAAAGA GTTATTACTT TCCCGCCAGT TAGTTATCGT GGGGATCACC
GGGGCAACCA TCGCTCTCAG TAATCAAGCC AAAACCCTAG GACTTGCCAT CGTCAAGGCG
GGCAAACAAA GCGTGACGCC TCCTCCTGCG CCGCGTCAAA CGAAGGTTTT GAAGCAAAAT
ATCCGCTCAG GCCAGCAGGT CTATGCAAAA AATGGCGATT TAATCATATT TGGTGCCGTA
GGTAATGGCG CTGAAGTCAT CGCCGATGGT AGCATTCATA TTTATGGCGC ATTACGAGGA
AAAGCCATGG CGGGCGCGGC TGGCGACAGC AGCGCAGTGA TCATCGCCCA TTCCCTCGAG
GCTGAATTAG TTTCAATAGC AGGGCAATAT TGGCTCGCTG AAAATCTACA ACAACATAGC
TCAGATAAAA GCGGCTGCAT TCGCTTAAAT GGCGAGTCGC TTATCGTTGA ATCATTGCCC
CTCTAA
|
|---|
| Protein sequence | MSKPSLELKG ASFTLSVLHI NSSDLNAVMA ELDSKLAQAP QFFLGAPLVV NLSAIQDNDF
NLHGLKELLL SRQLVIVGIT GATIALSNQA KTLGLAIVKA GKQSVTPPPA PRQTKVLKQN
IRSGQQVYAK NGDLIIFGAV GNGAEVIADG SIHIYGALRG KAMAGAAGDS SAVIIAHSLE
AELVSIAGQY WLAENLQQHS SDKSGCIRLN GESLIVESLP L
|
|---|
| |