| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2223 |
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| Symbol | fadE |
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| ID | 4256987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2635120 |
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| End bp | 2637567 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638122891 |
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| Product | acyl-CoA dehydrogenase |
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| Protein accession | YP_738268 |
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| Protein GI | 114047718 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00555832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.222627 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTACCC TACTTTGGAT CATCGCCATG ATCTTAGTGC TAGGAGCCCT AGCTTACCTT
CGGGTATCTT TGCTCACTGC CACTATTGCA GCCGCTGTTG TGATGACAGC CGGATGGACA
CTCGATGTTG TTGGCCCTAT CTCTTGGATT ATCTTCCTGG TGATCGCGCT GCCCCTCAAT
ATCAGTGCAT TTAGACAAAA TGTTATCAGC CGCCCGCTGA TGAAGATGTA CCGTGGCATC
ATGCCCGAAA TGTCTTCTAC CGAAAAAGAA GCGATTGAAG CCGGTACCAC TTGGTGGGAA
GCCGATCTGT TTGCGGGTAA CCCAAACTGG AAAAAACTCC ACAATTACCC TGTCGCTCGT
TTAAGTGCCG ATGAGCAAGC CTTCTTAGAC GGTCCAGTTG AAGAAGTGTG CCGCATGGTG
AATCAACACC AAGTATCACA TCAACTGGCT GATTTGCCTG CTGATGTATG GCAATACCTG
AAAGATCACG GCTTCTTCGC CATGATCATC AAGAAAAAAT ACGGCGGTTT AGAGTACTCA
GCCTACGCCC AATCACGCGT ACTGCAAAAG CTTGCAGGTT TAAGCAGCGA GCTGGCATCC
ACTGTAGGTG TGCCTAACTC CTTAGGCCCT GGCGAACTGT TACAACACTA TGGTACGCCT
GAGCAGCAAA ACCATTACCT GCCGCGTTTA GCCAAAGGTT TAGAAGTCCC TTGTTTCGCA
TTAACTAGCC CAGAAGCTGG TAGCGACGCG GGTTCTATCC CTGACTTTGG TGTCGTGTGT
AAAGGTCAAT GGGAAGGCGA AGAAGTCTTA GGTATGCGCT TAACCTGGAA CAAGCGTTAT
ATCACCCTCG CGCCAGTTGC GACTGTATTA GGTCTGGCGT TTAAACTGCG TGACCCTGAT
CACCTGTTAG GCGATAAAGA AGAGCTGGGC ATTACCTGTG CGCTGATCCC AACTGACGTT
GAAGGCGTTG AAACGGGTCG TCGTCACTTC CCGCTGAACT GTATGTTCCA AAACGGTCCT
ACTCGCGGTA AAGACGTATT CGTACCATTA AGCTTTATCA TCGGTGGTCC GAAAATGGCT
GGCCAAGGCT GGCGTATGCT GGTTGAGTGT TTATCTGTTG GCCGTGGTAT CACGCTGCCA
TCAAACTCTG CCGGTGGCGT GAAAACCGCC GCTCTGGCAA CGGGTGCCTA TGCACGTATT
CGTCGTCAAT TCAAACTGCC GATTGGTAAG TTAGAAGGGA TTGAAGAGCC AATGGCACGC
ATCGGTGGTA ACGCCTACCT GATGGATGCA GTGACTTCAT TAACCACCAC AGGTATCGAC
TTAGGTGAAA AACCTTCAGT TATCTCGGCT ATCGTGAAAT ATCACCTGAC CGATCGTATG
CAGAAATGCG TTATCGACGC TATGGATATC CACGGTGGTA AGGGTGTGTG TTTAGGCCCT
AACAACTACC TAGGTCGTGG CTATCAAGCG GCTCCAATTG CGATTACTGT TGAAGGTGCA
AACATCCTGA CACGTTCGAT GATCATCTAT GGTCAAGGTG CAATCCGTTG TCATCCTTAT
GTATTGGCCG AAATGGAATC AGCGTTTGAC ACTGAGTCTG GCCAAGGCTT AGCCAACTTC
GATGCGGCCA TCTTCGGTCA CATTGGTTTT GCGACCAGTA ACTTTGTCCG TAGCTTCTGG
TTAGGTCTGA CATCAAGCCG TTTCTCTAAC GCGCCATACT CAGATAAAAC CAAGCGTTAT
TATCAACATA TGAACCGTTT CAGTGCCAAC TTAGCTCTGC TTTCAGACTT AGCCATGGCA
ACCTTAGGCG GTAACTTAAA ACGTAAAGAG CGTATTTCTG CCCGCTTAGG CGATCTGTTA
AGCCAGTTAT ACCTCGCTTC TGCAACTTTA AAACGTTACC AAGATGAAGG CCGTCAAACC
GACGATCTGC CACTGGTACA ATGGGCGGTT GAAGATGCTC TGTACAAGTT ACAGGCTTCA
TTAGACGATT TACTGGATAA CTTCCCTATG GGTCTAGGCG GCGTATTACG TGCCATCATG
TTCCCATTCG GCCGTCCACT GAAACGTCCA AGCGATGTGT TAGATCATAA AGTGGCTAAG
ATCATGCAAA CCCCTTGTGA AAGCCGTGAT CGTTTAGGTA AAGGCCAATT CTGGACTAAC
TCTGAGCACA ATGCTGTGGG TATCCAAGAG CAAACGCTGA AGGATATTCT GGCTGCCGAA
CCTTTATTCG ATAAAGTCTG TAAGGCCAGT GGCAAGCGTT TACCTTTCAT GTGGTTAGAT
AAAGTCGCCG CTGAAGGTAA AGCCTTAGGT GTATTGAGCG ACAGCGAAGT ACAACTGTTG
GAACGTGCTG AAATCGGCCG TATGAAGTCT ATCAATGTGG ATGACTTTGA CCCTGCAGAG
CTGCGTCCAG AAGTGGTATC TACCACTTCA CAGGAACGCG CAGCCTAA
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| Protein sequence | MTTLLWIIAM ILVLGALAYL RVSLLTATIA AAVVMTAGWT LDVVGPISWI IFLVIALPLN
ISAFRQNVIS RPLMKMYRGI MPEMSSTEKE AIEAGTTWWE ADLFAGNPNW KKLHNYPVAR
LSADEQAFLD GPVEEVCRMV NQHQVSHQLA DLPADVWQYL KDHGFFAMII KKKYGGLEYS
AYAQSRVLQK LAGLSSELAS TVGVPNSLGP GELLQHYGTP EQQNHYLPRL AKGLEVPCFA
LTSPEAGSDA GSIPDFGVVC KGQWEGEEVL GMRLTWNKRY ITLAPVATVL GLAFKLRDPD
HLLGDKEELG ITCALIPTDV EGVETGRRHF PLNCMFQNGP TRGKDVFVPL SFIIGGPKMA
GQGWRMLVEC LSVGRGITLP SNSAGGVKTA ALATGAYARI RRQFKLPIGK LEGIEEPMAR
IGGNAYLMDA VTSLTTTGID LGEKPSVISA IVKYHLTDRM QKCVIDAMDI HGGKGVCLGP
NNYLGRGYQA APIAITVEGA NILTRSMIIY GQGAIRCHPY VLAEMESAFD TESGQGLANF
DAAIFGHIGF ATSNFVRSFW LGLTSSRFSN APYSDKTKRY YQHMNRFSAN LALLSDLAMA
TLGGNLKRKE RISARLGDLL SQLYLASATL KRYQDEGRQT DDLPLVQWAV EDALYKLQAS
LDDLLDNFPM GLGGVLRAIM FPFGRPLKRP SDVLDHKVAK IMQTPCESRD RLGKGQFWTN
SEHNAVGIQE QTLKDILAAE PLFDKVCKAS GKRLPFMWLD KVAAEGKALG VLSDSEVQLL
ERAEIGRMKS INVDDFDPAE LRPEVVSTTS QERAA
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