| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2109 |
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| Symbol | |
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| ID | 4258095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2490534 |
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| End bp | 2493050 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638122777 |
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| Product | glucan 1,4-alpha-glucosidase |
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| Protein accession | YP_738154 |
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| Protein GI | 114047604 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | [TIGR01535] glucan 1,4-alpha-glucosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.185275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTGA CAACAGTACC TTCGCAGCAG GCTCGCAGCT TAACTCACCG CCGCAACTTA
ACTCGTAAGC CGATTGCGCT CGCAATTGCC GCAAGCATAA TCGGCGTTGC CAGCTTAACG
GGCTGCTCAC CCTCGGCCCC CAATGCAGAC ACATCAACAC CAACCGTCAC AAAAGCCACA
GACGCACAGA TTGCCCCCGG CGCCCCAGGC AAAGCCCCAA CCTGGGCGTT CTCCGGCAAA
ACCGGTATCG GTACCTCCTA TGAGCCTTAT ACTCAAGGGC AATACCAAGA CAGCATCCAA
AATCCCATTA GCCGAGTGTG GTTCTCCGTC GCGCAGGGGA TTTTAACCGA GACCATGTAC
GGCCTTATTC ACAACGCTCA GCTCAAAGAG TTGCAATTTG TGATCACTGG CAATGGCTTT
GTCGATACCG AAAAAGACAA CACTATCAGC AGCATTGAAT ACTTAGATAC CGATGCCAAT
GGCCGCCCAC AATCCTTGGC CTATAAGATT ATCAATCGCG ATGTTGAAGG TAAGTATCAG
ATAGAAAAAC ATATCTTTAC CGATCCCGAC CGCGATACGC TGATGATGCG CGTGACGTTT
ACCGCCTTTG AAGCAGGCAT CACACCGCAT TTATACGTTA ACCCCCATAT CGATAATGCG
GGCGCGAATG ATATTGGCAG AATCGATCAT CAAGCCCTTA TCGCTCGCAC GGCGAATCCC
CACAGCAGCG TAATGACAGT TAAATCGGAT ATCGATTTTA CGCAGGCGAC CACGGGTTTT
GTCGGTGTAT CCGACGGTTT GGCCGATTTA GCCGATAACG GCAAGCTCGA TACGCTGTAT
CAGGCCACCA GCAACGCCGA AAAGCCTACT CAAGGCAACA TTGCTTTTAC CGCCAGTTAT
CCCGCACTCC AAGCTAATCA ACCTCTTAAT GTGAATTTGG TGATTGGTTT TGGCCATGAT
GAAACGAGCA GTTTAGCCAA TGCCAACGCC AGCTTAACGG CGGGGTATGA TGCAGTGCTG
AGCCAATACA ACGCTGGTTG GCACAGTTAT TTACAATCGC TACCCGCGAT GCCTGATATG
GCGCAAAGCA CCACAGATAA TGGCAAGCTG CTGTATACCA GTGCCATGGT ACTCAAGGCG
CAGGAAGATA AAACCTATGC GGGCGCCCTT ATCGCTTCGC TTTCTAATCC TTGGGGCGAT
ACAGTCCCTG CTGTCACACC GAGCACGGGC TACAAGGCCG TTTGGCCGCG AGACTTTTAC
CAATGTGCCA TGGCATTTCT CGCCATGGGC GATACGCAAA CGCCTAAAGT CGCCTTTGAG
TACCTTAAAA AGGTGCAAGT GAGTGACAAA ACTCCAGGCT ATAGCGGCAC GCCCGGTTGG
TTCTTACAAA AGACCCATGT GGATGGCCAA ATCGAATGGG TGGGCGTACA GCTCGACCAA
ACGGCGATGC CGATCATGCT CGGCTGGAAA CTCTGGCAGG CAGGCGTGCT GAGTCAAGCG
GAACTGAGCC ATTGGTATCA AGAGATGCTA AAAGCCGCGG CGGACTTTTT AGTCAGCGGC
GGTGAGGTGA ATCTTGACTG GAATCACACC CAAATTACGC CACCGAAAAC CCAACAAGAA
CGTTGGGAAG AACAAGCTGG TTATTCGCCC TCCACCACGG CCGCAGTGCT CGCAGGCTTA
GTGGCCGCGA GTGATATTGC CAAGGCAGTA AACGATAGCG ATGCCAGTCA GCGTTATCTC
GCAACCGCCA AAACGCTTAA TCAACAACTT GAAAAACACT TAGTGACGAC CCAAGGTTTG
CTTACCGATA GCCAAGGCAT TAAGGCGCCT TACTATTTGC GCTTAAGCCC TAACGGTGAG
CCAAACACCG CCGAGCAACT CGCCGCTAAT AATGGTCGTG CGGGATTAGA TCAACGTCAG
ATCCTCGATG GCGGCTTTTT AGAGCTGGTG CGCTACGGCG TGCGTGGCGC CACCGATAAG
CTGATTAATC AAAGCCTAGC GCTGGTGGAT AACACTGAGC TTGAGGACAA TTTACGCCTC
AAATACAACT TTACTGCCAA AGATGGCAGC AGCGTTCCCG GCTTTAGGCG TTACGGTAAC
GATGGCTACG GTGAAGATAC CCTCACTGGC GCAAACTACG CCGAATCTGG CAGTAATAGC
GACAACCAAC GCGGCCGCGT CTGGCCCTTC TTCACTGGCG AGCGTGGCCA TTTTGAATTG
GCCCTTGCCA GCGCTAAGGG AGAGCTAAGC GGTGCTCACG CGCAGCAAAC CAAACAGCAG
CTAATCAATA CCTATGTGCA AGGTATGGAA ACCTTTGCCA ACGCGGGGCT AATGCTCCCC
GAACAAGCAT GGGACGGTGT GGGTAACGCC ACACGTTACC AATATCAACT CGGCCAAGGT
ACTAACTCCG CCACCCCGCT CGCCTGGACC CACGCTGAAT ACATTAAGCT GGTACGTTCA
ATGAGCGATG GTCGAGTCTG GGATAACTAC CCTATCGTCC CAGAAGCGTT GAAATAA
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| Protein sequence | MALTTVPSQQ ARSLTHRRNL TRKPIALAIA ASIIGVASLT GCSPSAPNAD TSTPTVTKAT
DAQIAPGAPG KAPTWAFSGK TGIGTSYEPY TQGQYQDSIQ NPISRVWFSV AQGILTETMY
GLIHNAQLKE LQFVITGNGF VDTEKDNTIS SIEYLDTDAN GRPQSLAYKI INRDVEGKYQ
IEKHIFTDPD RDTLMMRVTF TAFEAGITPH LYVNPHIDNA GANDIGRIDH QALIARTANP
HSSVMTVKSD IDFTQATTGF VGVSDGLADL ADNGKLDTLY QATSNAEKPT QGNIAFTASY
PALQANQPLN VNLVIGFGHD ETSSLANANA SLTAGYDAVL SQYNAGWHSY LQSLPAMPDM
AQSTTDNGKL LYTSAMVLKA QEDKTYAGAL IASLSNPWGD TVPAVTPSTG YKAVWPRDFY
QCAMAFLAMG DTQTPKVAFE YLKKVQVSDK TPGYSGTPGW FLQKTHVDGQ IEWVGVQLDQ
TAMPIMLGWK LWQAGVLSQA ELSHWYQEML KAAADFLVSG GEVNLDWNHT QITPPKTQQE
RWEEQAGYSP STTAAVLAGL VAASDIAKAV NDSDASQRYL ATAKTLNQQL EKHLVTTQGL
LTDSQGIKAP YYLRLSPNGE PNTAEQLAAN NGRAGLDQRQ ILDGGFLELV RYGVRGATDK
LINQSLALVD NTELEDNLRL KYNFTAKDGS SVPGFRRYGN DGYGEDTLTG ANYAESGSNS
DNQRGRVWPF FTGERGHFEL ALASAKGELS GAHAQQTKQQ LINTYVQGME TFANAGLMLP
EQAWDGVGNA TRYQYQLGQG TNSATPLAWT HAEYIKLVRS MSDGRVWDNY PIVPEALK
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