Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2103 |
Symbol | |
ID | 4258089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2484225 |
End bp | 2484986 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638122771 |
Product | AraC family transcriptional regulator |
Protein accession | YP_738148 |
Protein GI | 114047598 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.985837 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGCGTT ATTTTCACTT GCATGTCGCG GAAGATTTAC CACAGCCAAT CGAACAATGC TTCTATCCTG ACGGCGGCAC AAGCCTGCAT TTCTATTTAC CATCACCCAG CACTGGCGAT ACGCCTTTAG CGTATTTTTA CTCGGGACAG CAGCGGCATT ATCACAGCTT CGCACCGGGT ACCGAACAAA TTACGGTGCG TTTTCAGCCC GGTGGCGCAT TCCATTTATT GGGTCTTGAG CTTGCCGCTA TTCGCGTCGA TACGACAGCA AACGTTATCG ATGTGACCCA GTGGCCCATC GTTGGTTTAA CGGCGCTCTT ATACCAACTC GTCGACACAC CACAGCCTAG CGAGCGTATC GCCCTCGTGG AACACTGGCT ATTGCAACGA GCGAAGCAAT TAGACTTAAG CTTATCGACG CGAATGAGTC TAGTCCCCGC AACCTTACCT CGACTCATCC ACACCCAAGC CAATTTAGAC ACGTTTTACG GGCAACTCCC CATGAGTCGG CGCCAATTTG AACGTAAATT TAAGCAGGAA ACGGGTTTAT CGCCCGCGCA ATTATTGCAG CTGAATCGAG TCAAAATCGC CCGCAACTTA TTGAGCCAAT CGCCATCCCT TAGTCTCGCG CAAGTGGCAT TTGATTGTGG ATTTTACGAT CAAGCCCACC TACACCAGCA TTTTTTGCGG GTAATGCAGC AAACACCGGG GCAATATAAA AAACGCAAGA TGTCGCAAAT CTCCAATAAA ACGCCCGATT AA
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Protein sequence | MQRYFHLHVA EDLPQPIEQC FYPDGGTSLH FYLPSPSTGD TPLAYFYSGQ QRHYHSFAPG TEQITVRFQP GGAFHLLGLE LAAIRVDTTA NVIDVTQWPI VGLTALLYQL VDTPQPSERI ALVEHWLLQR AKQLDLSLST RMSLVPATLP RLIHTQANLD TFYGQLPMSR RQFERKFKQE TGLSPAQLLQ LNRVKIARNL LSQSPSLSLA QVAFDCGFYD QAHLHQHFLR VMQQTPGQYK KRKMSQISNK TPD
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