| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2061 |
|---|
| Symbol | |
|---|
| ID | 4255932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 2431205 |
|---|
| End bp | 2431879 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 638122729 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_738106 |
|---|
| Protein GI | 114047556 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0183643 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000224709 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTAG CTGAGGTTAA AGGGGTCTTA TTCGACCTTG ACGGTACCCT TGCCGATACC
GCGCCGGATC TGGTTCAGGC CCTTAACCTC AGTTTGTCTG ATGTCGGTAT CGCGGCAAAA
CCTTTAGCTG ACATGCGTAG CGCCGCCTCC CATGGCAGCT TTGCCTTAGT CGATGCGGCG
ATTCCCGGTG CGGATGACGC ACTGCGCACT CAAGTACAGC AAGGACTCCT CGCCCACTAT
CAAAGGATCA ATGGCGACCA TTGCCAGTTG TTTGATGGTA TCGCTCCTCT GCTCGATTGG
CTCGAGTTAT GCCGTGTGCC ATTTGGGGTG ATCACGAATA AACCCGCCCG CTTTACTCGC
CCTCTATTGC ATAAGCTTAA GCTCAGCTCG CGTATGCCAG TGATGATCAG TGGCGATTCG
ACTCGTTACC CCAAGCCCCA TACCGCACCT ATGCTATTGG GCGCGCAGCA GCTGCAGTGC
CAGCCACTGC AAATCCTCTA TCTAGGGGAT GCGGAGCGGG ATCTACTCGC GGCTCAAGCG
GCGGGCATGC TCGGCGGTGT GGCCTTGTGG GGATATTTGA GTGAGGCCGA TACGCCCGAT
GCGTGGCCTG CCTATGCGCA GTTTAATTCA CCTTCGAGTT TGCATTCGGC CTTAAGCCAA
GCATTGGCCA AATAG
|
|---|
| Protein sequence | MSLAEVKGVL FDLDGTLADT APDLVQALNL SLSDVGIAAK PLADMRSAAS HGSFALVDAA
IPGADDALRT QVQQGLLAHY QRINGDHCQL FDGIAPLLDW LELCRVPFGV ITNKPARFTR
PLLHKLKLSS RMPVMISGDS TRYPKPHTAP MLLGAQQLQC QPLQILYLGD AERDLLAAQA
AGMLGGVALW GYLSEADTPD AWPAYAQFNS PSSLHSALSQ ALAK
|
|---|
| |