Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2034 |
Symbol | |
ID | 4258196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2396716 |
End bp | 2398773 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638122702 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_738079 |
Protein GI | 114047529 |
COG category | [R] General function prediction only |
COG ID | [COG3211] Predicted phosphatase |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.361147 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGG CCACCTTTGA CCCGACACTT TATAATAAAA GTAATAACGA ACCTTTTAAT CAAGTGTTAG ATAAACATTT ATCCCGCCGC AATTTTGTTA AAAGCGGATT AGGCCTAGGG GCAATGACCG CTTTTGCAGG TGTGGGATTA GTAGGCTGTG GTTCGGACAA TTCCCCTGCC CCAACACCTA TCGATCCTGT GCCGCCACTG CCACCGACTC AAAGTAGCGC TAAATTAAAC TTTACATCAG TCGCTGGCGC TCGCTTGGAT GCGGTTGTGG TACCCGAAGG TTACAGCGCG CAAGTACTTG CCCCTTGGGG AACACCATTA AATTCTAAGG CCGCGCCTTG GAAAGCCGAT GGCAGCAATA CCGCCGATGA CCAAGCAAAC TCCGTTGGTA TGCACCATGA TGGTATGCAT TTCTTTCCAT TGAATGACGC CGGCGATGAC GGTTTACTCT GTATCAACCA TGAATATATC GATGAGATGG CCTTACATCC GAATGGCCCA ACCGTGGATG AAACCACTGG ATTACGTACC ATTATCGATG AGATCCGTAA GGAAATTAAT GCCCACGGCG TGTCGGTGGT TAGAATTAAA CTCGTTAATA ATCAATGGGA AGTTGTTTAC AACGACAGCC ATAACCGCCG CTTTACCGGC GCAACTGTGA TGGATATCGC CGGTCCCCTC GCCTATTCAC CGCTACTCGA AACCCGTTAT TCCCCCGATG GCAGTCAGGC TCGTGGCACC TTAAATAACT GTGGTAATGG TTACACGCCT TGGGGCACCT ATTTGACCTG CGAAGAAAAC TGGCCGGGTT ACTTTGCCAA CCGTGGCACT TTAGCCGCCG ATCAAGCGCG CATCGGGATC AGCAAAAGCA GCACTCGCTA TGGCTGGGGT GATTTAGCGG GTCACGCCGA GGAACGTCTC GATGAATTCG CGCGTTTTGA TGTCACGCCA AAGGGCAATA GTGCACAAGA TGATTATCGC AACGAGGCTA ATGGCCACGG TTATATCGTT GAAATTGACC CCTACAATCC AAGTTCACGC GCCATCAAAC GAACTGCCCT TGGCCGCTTC CGCCACGAGG GTTGTACCTT CGGAAAATTA GCCGAAGGTA AGCCTGTGGT GTTCTACTCT GGCCACGATT CTCGATTCGA ATACTTATAT AAATTTGTGT CGAATGCGGT GTGGGATCCA CAGGATGCCA ACAGCTCAAA TCGCCTGCAA ATGGGTGATA AGTATATGAA TGAAGGAACA TTATATGCCG CTAAGTTTAA CGAAAATGGC GGTGGTGTCT GGTTACCTTT AACCTTAGAT AGCCAAACGA CAGACGGTAA AACCCTAGGT GATAGCTTTG CCAGTCTGGC CGAGATTATC TTAAATACCG CGGGTGCAGC GGATTTAGTC GGCGCGACAC CTATGGATCG ACCTGAATGG TGTGCGGTAG ACCCCTTCAC AGGTTCAGCC TATTTAACCC TGACCAACAA CTCTAAACGT ACCGAAGCTA ACCCTGCCAA CCCCAGACTT AAAAACACCT TTGGACATAT TATTCGTTGG GATGAAGGTG ATATAGACAC TGAATTCACA TGGGATATTT TTGTCTTTGG CTCACCGAGT GATGGCAATG CCGAGACCAA CCTGTCGGGC TTAACGGATC TAAACCAATT TGCCAGCCCC GATGGATTGG CCTTCGACGC CCGCGGTATT TTATGGGTGC AAACCGATAA TGGTGCCAAA GAAGTCGCCG AAGAAACCAA CGATCAAATG CTGGCGATTG TGCCATCAAC CTTAGTCGAC AGTGCTAACA AGCAAGCGAG TGTGACGGCC GAAAACCAAA TGGAATTGAA GCGTTTCTTT GTCGGGCCAA ACGATTGCGA AGTCACAGGT TTTGCAATCA GCCCCGATTA CACTTCGGTT TTTGCCAACA TTCAGCATCC GGGTAACTGG CCCTATTCGA ATAATGCGGC TGAAATTACC CCCGCAGGTA CCGTGCTGCG CCCACGCGCG GCAACGGTAG TGATCCGCAA ACTCGATGGT AAAGAAGTGG CGGTCTAA
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Protein sequence | MSKATFDPTL YNKSNNEPFN QVLDKHLSRR NFVKSGLGLG AMTAFAGVGL VGCGSDNSPA PTPIDPVPPL PPTQSSAKLN FTSVAGARLD AVVVPEGYSA QVLAPWGTPL NSKAAPWKAD GSNTADDQAN SVGMHHDGMH FFPLNDAGDD GLLCINHEYI DEMALHPNGP TVDETTGLRT IIDEIRKEIN AHGVSVVRIK LVNNQWEVVY NDSHNRRFTG ATVMDIAGPL AYSPLLETRY SPDGSQARGT LNNCGNGYTP WGTYLTCEEN WPGYFANRGT LAADQARIGI SKSSTRYGWG DLAGHAEERL DEFARFDVTP KGNSAQDDYR NEANGHGYIV EIDPYNPSSR AIKRTALGRF RHEGCTFGKL AEGKPVVFYS GHDSRFEYLY KFVSNAVWDP QDANSSNRLQ MGDKYMNEGT LYAAKFNENG GGVWLPLTLD SQTTDGKTLG DSFASLAEII LNTAGAADLV GATPMDRPEW CAVDPFTGSA YLTLTNNSKR TEANPANPRL KNTFGHIIRW DEGDIDTEFT WDIFVFGSPS DGNAETNLSG LTDLNQFASP DGLAFDARGI LWVQTDNGAK EVAEETNDQM LAIVPSTLVD SANKQASVTA ENQMELKRFF VGPNDCEVTG FAISPDYTSV FANIQHPGNW PYSNNAAEIT PAGTVLRPRA ATVVIRKLDG KEVAV
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