Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2015 |
Symbol | |
ID | 4258615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2378026 |
End bp | 2379141 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638122682 |
Product | L-alanine dehydrogenase |
Protein accession | YP_738061 |
Protein GI | 114047511 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0686] Alanine dehydrogenase |
TIGRFAM ID | [TIGR00518] alanine dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000641536 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0233457 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTATTG GTGTACCAAA GGAAATTAAA AACCACGAGT ATCGTGTCGG TATGGTTCCT TCAAGCGTTC GCGAATTGAC CATCAAAGGT CATGAAGTGT TTGTTGAAAC TAATGCCGGC ACGGGAATTG GTTTTTCTGA TCAGGATTAT GTTGATGCAG GTGCCAAAAT ATTAGCAACT GCTGCTGAAG TCTTTGCTAA AGCAGAGATG ATCGTAAAGG TAAAAGAGCC TCAAGCAGTC GAACGCGCTA TGCTGCGTCA TGACCAGATT TTATTCACTT ATCTGCATTT AGCGCCAGAT TTACCACAAA CTGAAGATTT AATTAAAAGT GGTGCCGTGT GTATCGCTTA CGAAACCGTG ACTGATGACC GTGGTGGCTT ACCTCTGCTG GCCCCAATGT CTGAAGTGGC TGGTCGCATG TCGATTCAAG CAGGCGCGAT GGCATTAGAA AAATCCTCTG GTGGTCGCGG CATGTTATTA GGCGGTGTTC CAGGTGTTGA GCCTGCAAAA GTAGTGATCA TCGGTGGTGG CATGGTCGGT ACCAATGCTG CACAAATGGC TGTGGGTATG GGCGCTGATG TCGTTGTTCT TGACCGTAGC ATCGATGCAC TGCGTCGCTT AAACGTACAA TTTGGTTCTG CAGTTAAGGC TGTTTACTCA ACTGCCGATG CAATTGAGCG CCATGTATTA GAAGCTGATC TTGTGATTGG TGGCGTATTA ATTCCAGGTG CTGCGGCGCC TAAGCTTGTA ACACGTAGCA TGATCGCACG CATGAAGCCA GGCAGTGCTA TCGTTGACGT AGCAATCGAT CAAGGTGGTT GTGTCGAAAC TTCACATGCA ACGACTCACC AAGATCCAAC CTACATCGTT GATGACGTGG TGCACTACTG TGTGGCAAAC ATGCCAGGTG CTGTAGCCCG CACTTCAACC TTCGCTCTGA ATAACGCGAC TCTGCCTTAT ATCCTTAAGT TAGCTAACTT AGGTTATAAA GCCGCCCTGT TACAAGACAA ACACTTACTG AACGGTTTGA ACGTGATGCA CGGCAAACTG GTTTGTAAAG AAGTGGCGCA AGCATTAAAT CTTGAGTACA CAGCGCCAGC AAGTTTATTA GCCTAA
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Protein sequence | MIIGVPKEIK NHEYRVGMVP SSVRELTIKG HEVFVETNAG TGIGFSDQDY VDAGAKILAT AAEVFAKAEM IVKVKEPQAV ERAMLRHDQI LFTYLHLAPD LPQTEDLIKS GAVCIAYETV TDDRGGLPLL APMSEVAGRM SIQAGAMALE KSSGGRGMLL GGVPGVEPAK VVIIGGGMVG TNAAQMAVGM GADVVVLDRS IDALRRLNVQ FGSAVKAVYS TADAIERHVL EADLVIGGVL IPGAAAPKLV TRSMIARMKP GSAIVDVAID QGGCVETSHA TTHQDPTYIV DDVVHYCVAN MPGAVARTST FALNNATLPY ILKLANLGYK AALLQDKHLL NGLNVMHGKL VCKEVAQALN LEYTAPASLL A
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