Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1987 |
Symbol | |
ID | 4256615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2349976 |
End bp | 2351475 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638122653 |
Product | ABC transporter related |
Protein accession | YP_738033 |
Protein GI | 114047483 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.479214 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000308121 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCTTA TTTTAGAACT CAAGCAGATC AGTAAGCATT ATCCGGGCGT CAAAGCCCTT GAGGATGTGA GCTTACGGTT ATTTGCGGGG GAAGTTCACG CCCTATTGGG CGAAAACGGT GCGGGTAAAT CGACGCTGGT GAAAGTGATG ACAGGCGCCC AGTCGAAAGA CATGGGCGAC ATCCTTTTCC TCGGTGAGCC GCAACACTTC AACACACCAA TGGACGCGCA AAAGGCGGGG ATCAGTACGG TTTATCAAGA GGTGAACTTA GTGCCTAACC TGACCGTGGC ACAAAACCTG TTCCTCGGTT ACGAACCGCG CCGCCTTGGG CTGATCCATT TTAAAAAAAT GTATGCCGAC GCGCGGGCCG TGTTAACCCA GTTCAAGCTG GATATCGATG TTAGCGCACC GCTGTCGGAT TATTCCATCG CGGTGCAGCA ACTGATCGCC ATCGCCCGCG GCGTAGCCAT GTCGGCCAAG GTATTAGTGC TCGATGAGCC TACCGCGAGC TTAGATGCCA AAGAAGTGCA AGTGCTGTTT GGGATCTTAA ACCAGCTCAA AGCCAAGGGC GTGGCTATCG TCTTTATCAC TCACTTCCTC GATCAGGTTT ATCAGATAAG CGATCGCATT ACCGTATTAC GTAACGGGCA GTTTATCGGC GAATATCTGA CGGCAGAACT GCCACAACCT AAGTTGATTG AAGCCATGCT CGGGCGTTCT CTGCAGGAGC AATTGGTTGA TAAACAGGAA AAGGAGCGCA CAGTCACCCG CGCTGAGGCT GTGCTCTTGT CCCTCAAAGA TGTGTCGGTA AAAGGTTCAA TCCAATCGAT GAATCTCACC GTGCCAAAGG GGCAGGCAGT TGGACTTGCG GGGCTGCTAG GCTCTGGGCG CAGCGAAGTC TGCAACGCCG TTTTTGGGCT GGACTTGGTC GATAGCGGCA GTATTCATTT GGCTGGCCAG AAATTGAATC TGTCACAACC CGTGGATGCA ATCAGCGCTG GAATCGCCCT GTGCCCAGAA GATCGCAAGA TTGACGGCAT CATCGGCCCT TTATCGATTC GTGAAAACAT CATACTCGCG CTGCAGGCGC GTATCGGTTG GTGGCGGTAT CTATCTAAAG CTCGGCAGCA GGAAATTGCC CAGTTCTTTA TCGATAAATT ACAGATTGCA ACCCCAGATG CGGATAAACC CATAGAGCAA TTGAGTGGTG GTAATCAACA GAAGGTGATC CTCGCGCGGT GGTTAGCCAT AGAGCCGATT TTATTGGTAC TGGATGAGCC GACCCGCGGC ATCGATATTG GCGCTCACGC TGAAATCGTC AAACTTATCA GAACCTTGTG TGATGAAGGC ATGTCGCTGC TTGTTGCATC GTCTGAGCTC GATGAGCTCG TGGCCTTTTC AAATAAAGTC GTGGTATTAC GCGACAGATA CGCAGTACGT GAACTTTCAG GAGCGGAATT AACCTCGCAA CACGTAATGC AAGCGATTGC GGAGGGATAA
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Protein sequence | MSLILELKQI SKHYPGVKAL EDVSLRLFAG EVHALLGENG AGKSTLVKVM TGAQSKDMGD ILFLGEPQHF NTPMDAQKAG ISTVYQEVNL VPNLTVAQNL FLGYEPRRLG LIHFKKMYAD ARAVLTQFKL DIDVSAPLSD YSIAVQQLIA IARGVAMSAK VLVLDEPTAS LDAKEVQVLF GILNQLKAKG VAIVFITHFL DQVYQISDRI TVLRNGQFIG EYLTAELPQP KLIEAMLGRS LQEQLVDKQE KERTVTRAEA VLLSLKDVSV KGSIQSMNLT VPKGQAVGLA GLLGSGRSEV CNAVFGLDLV DSGSIHLAGQ KLNLSQPVDA ISAGIALCPE DRKIDGIIGP LSIRENIILA LQARIGWWRY LSKARQQEIA QFFIDKLQIA TPDADKPIEQ LSGGNQQKVI LARWLAIEPI LLVLDEPTRG IDIGAHAEIV KLIRTLCDEG MSLLVASSEL DELVAFSNKV VVLRDRYAVR ELSGAELTSQ HVMQAIAEG
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