| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1980 |
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| Symbol | |
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| ID | 4256608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2339861 |
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| End bp | 2340928 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638122646 |
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| Product | arabinan endo-1,5-alpha-L-arabinosidase |
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| Protein accession | YP_738026 |
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| Protein GI | 114047476 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000532018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000349844 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAGCTA TGAGAGTCAC ACCGAAAACA GCCCTTAAAC GTCACCTTAA GATGCTCAAT
TGTGCGCTGC TAGGCGTATT GGGAACCCTA GGCCAAGTGA GTGCCAAGCA GGTGAGTATT
CACGATCCTG TGATGGCAAA AGAGGCCGGA CAGTATTATC TCTTCAGCAC AGGCCCCGGC
ATTACCTATT ATTCCTCAAA GGATAAAATC CATTGGGAAT TAGCTGGGCG GGTATTCGAA
ACCGAGCCTA GCTGGGCAAA GGGCGTTGCG CCAGAGTTTA ACGGCCATTT ATGGGCGCCG
GATATCATTG AGCATAACGG CTTGTTCTAT CTGTATTACT CAGTATCAGC CTTTGGTAAA
AACACCTCGG CCATTGGCGT GACAGTCAAT AAAACCCTCG ACAAAAATTC AAAGGACTAT
CAGTGGACAG ATAAGGGGAT CGTTATTCAA TCTGTGCCAA ATCGCGATGC ATGGAACGCG
ATTGATCCCA ATATTATTGT CGATGAGCAG GGTACACCTT GGATGAGTTT TGGCTCCTTC
TGGCAAGGGT TAAAACTGGT CAAACTCAAT CCAGACTTTA TCTCCATCGC CAAACCAGAG
GAGTGGCACA CCCTAGCCAA GCTAGAACGC CCCGCACTGC TGGGTGAAAC TGAGCCGGGC
CCTGCTGAAA TCGAAGCACC TTTTATCTAT AAAAAAGATG ACTATTACTA TCTTTTTGTC
TCCTATGGCC TTTGCTGTCG TGGGGACGAC AGCACTTATC ACTTAGCCGT GGGCCGCGCC
AAAACGGTGA CAGGGCCTTA CCTCGATAAA GAGGGCAAAG ACATGGCGCA AGGCGGCGGA
TCGGTTTTAC TGCATGGCAC TAAGGCTTGG CCGGGATTGG GCCATAACAG TGTTTATGCC
TTCGATGGCA AAGATTACTT AGTCTTTCAT GCCTACGAAT CGGCTGATAA TGGCTTACAA
AAACTCAAGA TGGCGGAACT GAGCTGGCGC CAAGGTTGGC CAGAGGTCGA TCCTAAGGCG
CTCAATCAAT ACCAGAGCGT ATTAGTTGCA CCCGAAGGAA CAAAATAA
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| Protein sequence | MPAMRVTPKT ALKRHLKMLN CALLGVLGTL GQVSAKQVSI HDPVMAKEAG QYYLFSTGPG
ITYYSSKDKI HWELAGRVFE TEPSWAKGVA PEFNGHLWAP DIIEHNGLFY LYYSVSAFGK
NTSAIGVTVN KTLDKNSKDY QWTDKGIVIQ SVPNRDAWNA IDPNIIVDEQ GTPWMSFGSF
WQGLKLVKLN PDFISIAKPE EWHTLAKLER PALLGETEPG PAEIEAPFIY KKDDYYYLFV
SYGLCCRGDD STYHLAVGRA KTVTGPYLDK EGKDMAQGGG SVLLHGTKAW PGLGHNSVYA
FDGKDYLVFH AYESADNGLQ KLKMAELSWR QGWPEVDPKA LNQYQSVLVA PEGTK
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