| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1979 |
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| Symbol | |
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| ID | 4256607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2337954 |
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| End bp | 2339858 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638122645 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_738025 |
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| Protein GI | 114047475 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3940] Predicted beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00334232 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000434537 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTCATA CAATCAACAA ACGAATGGCT ACGCTTGCGC TGGCCATGGG ACTTAGTGCG
ACCTGCTTGG GGGCAGGTAA CCTACATGCA GCAGAGAGTG CGAAGGACGC GGATGAAAAC
CGCATTACCG CAGCGACCTT TGCGAATCCG TTATTTCGAA ATGGGGCCGA TCCTTGGCTC
GAATACCACA ATGGTAACTA TTATCTAACG ACCACCACCT GGACCTCTGA GCTTGTGATG
CGTAAATCGC CCACCATTGC AGGGCTTGCC GATGCGCCGG CCCACAATAT TTGGAGCGGC
ACCGATAAGT CCAACTGCTG TAATTTTTGG GCATTCGAAT TCCACCCTCT GCAAACTGCG
CAGGGATTAC GTTGGTATGT AATTTACACC TCGGGCGTGG CAGAAAACTT CGATGGCCAG
CGTAACCATA TCCTCGAGAG TGAAGGCAGT GACCCTATGG GGCCATACAA GTTTAAGGGC
ACGCCAATGC CCGACCACTG GAATATCGAC GGCAGCTATT TGGAGTATAA AGGCCAGTTA
TATTTCCTCT GGTCCGAATG GCATGGCCAA GATCAAGTTA ACTTGATTGC CAAGATGAGC
AACCCTTGGA CCGTCGAGGG CGAACATAAG GTGATCACAG CGCCCATTCA CGACTGGGAA
AAATCAGGCT TAAACGTCAA CGAAGGCCCT GAAATCATCC AGCATGAGGG CAGAACCTTC
TTAGTTCACT CGGCAAGCTT TTGTAACACT GAGGATTATT CCTTAGCCGT GGTTGAACTC
ACCGGTGACG ATCCTATGGA TCCCGCCGCA TGGACTAAGT ACGACAAGCC TTTCTTTAGC
AAAGCCAATG GCGTCTATGG CCCTGGCCAT CATGGTTTCT TCAAGTCTCC CGATGGGAAA
GAAGATTGGC TCATTTACCA TGGCAACTCC TCGGCCTCAG ACGGCTGTAG TGGAACCCGT
GCGGCACGTG CTCAACCCTT TACTTGGGAT AACAAAGGTT TGCCTAAATT TGGTGAACCA
ATGGCGGATA AAAAGCAATT GCCTGTCCCA AGTGGCGAGT TTGGCCCGAT AACCACTCAA
GTGGAAGGCG TGAAATACCG CATCGTGAGC CGTGAGGTCG GTCAATGCCT AGTGACCAAT
GCCAAAGGCC AGGTCAGTGT CGGTAAGTGC GAGGATGACA ACAGCCAATG GGTTATCGAT
CCGAGTAACG ATGGCCTGTA TCGCTTTGCT AATGTGGGTC AGAGAACCTT TTTAACTCAG
GCTCAGTGCC AAGATGAGTC TTCAACGGCA GTGAATACTG CGCCTTGGGT CGCCTCCCGT
TGTCAGCGTT GGTCGGTGGA TTCGACCCGT GAGGGCTGGT TCCGTTTCGC AAACGATCGC
TCCATCGGCA ATCTGCAGGC GAAAAACTGC AGTAAAAAGG CCGGCGCCGA GGTGATTGCG
GGGGAAAACC GTGTCAGTGA ATGCACCGAT TGGCGGATTG AGCCAGTCTC CACATTTGCC
ATAGTCAACG CCCATAGCGG CCGAGTGGTC AGCGCCGAAC AATGTCAGCT TAAACCTAAT
GCCAATGTGG CTCAGTTTGA ATACACCGGC GATGCCTGTC AGCAGTGGCA AGCAATGCCG
ACAACCGATG GATTTTACCG TCTGCAATCC ATCCAACTTT CAAACAACAA GGCGCAACAA
TGCCTTGTGA CCAACGAAGG TAATCTGGAA CTAGGGGCGT GTAATGCAAT CGACAGCGAG
TTCCGTAGCG AGTTGATGCC AAATGGCTCA TTAAGGCTAG TGTCTCGCAA GGGTGGTTCG
TCCATGAAAG TGGCCAATGG CTCCTATGCC AATGGCGATA ACATAGTGGA AGACGTGTGG
AAAAACACCA TTTCACGACA GTTCTATTTT AGAGAGGTGA AATAA
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| Protein sequence | MTHTINKRMA TLALAMGLSA TCLGAGNLHA AESAKDADEN RITAATFANP LFRNGADPWL
EYHNGNYYLT TTTWTSELVM RKSPTIAGLA DAPAHNIWSG TDKSNCCNFW AFEFHPLQTA
QGLRWYVIYT SGVAENFDGQ RNHILESEGS DPMGPYKFKG TPMPDHWNID GSYLEYKGQL
YFLWSEWHGQ DQVNLIAKMS NPWTVEGEHK VITAPIHDWE KSGLNVNEGP EIIQHEGRTF
LVHSASFCNT EDYSLAVVEL TGDDPMDPAA WTKYDKPFFS KANGVYGPGH HGFFKSPDGK
EDWLIYHGNS SASDGCSGTR AARAQPFTWD NKGLPKFGEP MADKKQLPVP SGEFGPITTQ
VEGVKYRIVS REVGQCLVTN AKGQVSVGKC EDDNSQWVID PSNDGLYRFA NVGQRTFLTQ
AQCQDESSTA VNTAPWVASR CQRWSVDSTR EGWFRFANDR SIGNLQAKNC SKKAGAEVIA
GENRVSECTD WRIEPVSTFA IVNAHSGRVV SAEQCQLKPN ANVAQFEYTG DACQQWQAMP
TTDGFYRLQS IQLSNNKAQQ CLVTNEGNLE LGACNAIDSE FRSELMPNGS LRLVSRKGGS
SMKVANGSYA NGDNIVEDVW KNTISRQFYF REVK
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