Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1970 |
Symbol | |
ID | 4258115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2323506 |
End bp | 2323991 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638122636 |
Product | hypothetical protein |
Protein accession | YP_738016 |
Protein GI | 114047466 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000508823 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00854934 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTAACAT CTTGCATCAC AAGGTTAATT TTTGTGCTTA TTCGCAAACT TCTCCCACTC TCTCTCATGC TAGTTATGGT TAATCTCGCA GCTTGCAATG AAAAGACCAC GCAACAGATA AAAACAATGC CCGCTGACCC GACACTTTGT GCCTTTACAC AGGGGGATTG TATTAAACGC ATTGGCGATT TAGAGCTGAG TATTAGTCTA ACACCAGCGC ATGCACCGAG CGAAAAACCA TTAACATTGA AGCTATTATC ATCTGATGCT ATCGATAACC TTCAGATCCG TTTAGAAGGT AGAGATATGT TTATGGGGGT TATTCCAGTT AATCTTCGTG AAATAAACAA AACCAGCTAT GAAGGCCAGA TGATTTACGG CGCTTGCAGT AGTGGATACA TGGTATGGCG AGGATTTGTC CGTTTTAGTC GAAACGGTGT AGAACAAGCC GTTGTTTTTG ACTTTCTCGC CGATAATCCC AGTTAA
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Protein sequence | MLTSCITRLI FVLIRKLLPL SLMLVMVNLA ACNEKTTQQI KTMPADPTLC AFTQGDCIKR IGDLELSISL TPAHAPSEKP LTLKLLSSDA IDNLQIRLEG RDMFMGVIPV NLREINKTSY EGQMIYGACS SGYMVWRGFV RFSRNGVEQA VVFDFLADNP S
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