Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1965 |
Symbol | |
ID | 4258110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2319461 |
End bp | 2319940 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638122631 |
Product | hypothetical protein |
Protein accession | YP_738011 |
Protein GI | 114047461 |
COG category | [S] Function unknown |
COG ID | [COG3198] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0441287 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00747997 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGAAC AACAACCCTG GTATAAGCAG TTTTGGCCTT GGTTTTTAAT TATTCTTCCT TTGTGTGCCG TCGTCGCAAG TTTTACCACG CTAAAAATTG CCCTCTCTAA CTCTGACTCT CTGGTCGCCG AGGATTATTA CAAAGAAGGC AAAGCCATTA ACATGGACTT GAGTAAAGTC AAATATGCCA AGCAGCTCGG CATGCAATGG CAACTCGAAC AAAATCACCA CGAAGTGCTA TTCACCCAAC ACGGTGGACC TGCCTATCAA GCCGCGTTAA AAGTCGAATT TTATCACCCA ACGATTGCCG AAAAAGACAT CAAGATGACG GTAACGGCCG ATGCGAACCA TGTGTATCGC ATTACTCTGC CCGATGTATT AACAGGTGCT TGGGAAGTCC GCCTCGAAGG TTTTGACGGT AAATGGCGTA TTCATCAACG TGTCGAACTC AAAGACAACG TCCAATTGTG GTTGAACTAA
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Protein sequence | MSEQQPWYKQ FWPWFLIILP LCAVVASFTT LKIALSNSDS LVAEDYYKEG KAINMDLSKV KYAKQLGMQW QLEQNHHEVL FTQHGGPAYQ AALKVEFYHP TIAEKDIKMT VTADANHVYR ITLPDVLTGA WEVRLEGFDG KWRIHQRVEL KDNVQLWLN
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