Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1961 |
Symbol | |
ID | 4258106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2315313 |
End bp | 2316065 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638122627 |
Product | fumarate/nitrate reduction transcriptional regulator |
Protein accession | YP_738007 |
Protein GI | 114047457 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00754009 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAATAG AGCAGAATAA AAACCGTCGT CCCGCCGCGA GTGGGTGCAC AATTCATTGT CACGATTGCA GTATGGGTAC CCTTTGTATT CCGTTTACCC TCAATGCCAA TGAGCTCGAT CAACTCGACG ATATTATTGA GCGTAAAAAG CCTATTCAAA AAGGTGAGCA GATTTTTAAA TCAGGCGATC CGTTAAAATC TTTGTTCGCC ATCCGCTCTG GCACAGTCAA AAGTTACACT ATCACTGAAC AAGGCGATGA ACAGATCACC GGCTTTCACT TAGCGGGCGA TGTGATTGGC TTTGATGGCA TTCATGCTCA ATCCCATCAA AGTTTTGCCC AGGCCTTAGA AACCTCCATG GTGTGTGAAA TTCCCTTCAA TATTCTCGAC GAACTCTCGG GCACAATGCC CAAGCTACGT CAACAAATCA TGCGCTTAAT GAGTAATGAA ATCATGAGCG ACCAAGAGAT GATTTTATTG CTGAGTAAGA AAAATGCCGA AGAGCGCCTT GCTGCCTTTA TCAGTAATCT TGCTAACCGC TTTGGCAGTC GTGGTTTTTC TCCGAAAGAA TTCCGTTTAA CCATGACCCG TGGTGACATT GGTAACTACC TTGGTTTAAC TGTTGAAACC ATCAGTCGCT TGTTAGGCCG CTTCCAGAAG TCAGGTTTGA TTGAAGTAAA AGGCAAATAC ATCACCATAG TTGACCATCA TGAACTGAAT CTCTTGGCGG GTAACGCCAG GATCGCCAGA TAA
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Protein sequence | MTIEQNKNRR PAASGCTIHC HDCSMGTLCI PFTLNANELD QLDDIIERKK PIQKGEQIFK SGDPLKSLFA IRSGTVKSYT ITEQGDEQIT GFHLAGDVIG FDGIHAQSHQ SFAQALETSM VCEIPFNILD ELSGTMPKLR QQIMRLMSNE IMSDQEMILL LSKKNAEERL AAFISNLANR FGSRGFSPKE FRLTMTRGDI GNYLGLTVET ISRLLGRFQK SGLIEVKGKY ITIVDHHELN LLAGNARIAR
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