| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1955 |
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| Symbol | |
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| ID | 4258380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2309130 |
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| End bp | 2310323 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638122621 |
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| Product | aromatic amino acid aminotransferase |
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| Protein accession | YP_738001 |
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| Protein GI | 114047451 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00227805 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTTTCT CTCAGGTAGT ACTCGCACCC GCTGATCCCA TCCTTGGTTT AACCGATACC
TTTAAGGCCG ATCCACGCCA AGATAAAGTC AACCTCGGTG TTGGCATTTA TAAGGATGAA
GCAGGGCAGA CTCCGGTATT ACAGTCAGTA AAGAAAGCAG AAGCCCTATT GCTTGAGCAA
GAGAAAACCA AAAACTATTT AGGTATTGAA GGGGTTCAAA CCTATAACCA CGTAGTACAA
GAGCTGTTAT TTGGTGAGGG CAGTACGCTT GTGACGTCAG GCCGTGCCGC GACCGCTCAG
GCGCCTGGTG GTACTGGCGC ACTGCGTATT GCCGCCGAGT TTTTACTGCG CAACACCCCA
TCGCGCACTG TATGGGTAAG TAACCCAACT TGGGCTAACC ATCAAAATAT TTTTGAGACC
GCAGGTTTAA CGGTTAAAGA ATACGGTTAC TACAACGCTG CTGCACACGA TATTGATTTC
GATGCCATGA TGACAGATCT CGCCAATGCA CTGGCGGGTG ACATTGTTCT GCTTCACGGC
TGCTGCCATA ACCCAACGGG TATTGATTTG ACCTTAGCCC AATGGGAATT GGTTGCCAAC
CTGTGTGCAG ACAAGCAGTT AGTGCCATTG TTTGACTTTG CTTACCAAGG CTTTGGTGCT
GGGATTGAAG AAGATGCCGC TGGTCTGCGT TTAGTGGCAG CAAAAGTACC TGAGTTGTTA
GTGGCTAACT CATTCTCTAA AAACTTTGGT CTTTATAACG AGCGTATCGG CGCTGTGACT
GTGGTTGCAC AAAATGCCGA TGAAGCGGTG CGTGCCTTCA GCCAAGTGAA GCGTACTATC
CGCGCTAATT ACTCAAACCC ACCAGCACAC GGTGCGTTAA TCGTTAGCAC CATTTTAAGC
GATGCGGCAT TGAAAGCACT TTGGGTACAA GAGTTGACCG AAATGCGTGA GCGTATCGCC
GAGATGCGTA CCCTGTTCGT CCAAAGCTTA AAGGATGAAG GTGTGACTCA GGACTTTAGC
TTTATTTCCC GCCAAAACGG TATGTTTAGC TTCTCTGGTT TAAATAAAGC GCAGGTTGCA
CGCTTGAAAG ACGAGTTTGG TATTTATATC GTCGGCTCTG GCCGCATTAG TGTTGCCGGT
ATGACTAAAA CCAATATGCC TGTGATCTGT AAAGCGATTG CCCAAGTTCT TTAA
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| Protein sequence | MIFSQVVLAP ADPILGLTDT FKADPRQDKV NLGVGIYKDE AGQTPVLQSV KKAEALLLEQ
EKTKNYLGIE GVQTYNHVVQ ELLFGEGSTL VTSGRAATAQ APGGTGALRI AAEFLLRNTP
SRTVWVSNPT WANHQNIFET AGLTVKEYGY YNAAAHDIDF DAMMTDLANA LAGDIVLLHG
CCHNPTGIDL TLAQWELVAN LCADKQLVPL FDFAYQGFGA GIEEDAAGLR LVAAKVPELL
VANSFSKNFG LYNERIGAVT VVAQNADEAV RAFSQVKRTI RANYSNPPAH GALIVSTILS
DAALKALWVQ ELTEMRERIA EMRTLFVQSL KDEGVTQDFS FISRQNGMFS FSGLNKAQVA
RLKDEFGIYI VGSGRISVAG MTKTNMPVIC KAIAQVL
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