| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1947 |
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| Symbol | |
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| ID | 4258372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2298555 |
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| End bp | 2299733 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638122610 |
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| Product | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) |
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| Protein accession | YP_737993 |
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| Protein GI | 114047443 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00027939 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCAAAG CAACACTCAA CACTGATACA GTGCACCGTG TCGGCTTCTT GGATAAGGCA
TCGCTTCACA TTCCTATCCT TCGAATTCTA CAAGCAGACG GCACTACCTA TGAAACCGCG
GTTTTGCCTG TAATAGATGA AGCCTTAGCC ACCAAAATTT ACGATACTTG CGTATTTACG
CGGGTACTAG ATGAACGTAT GTTAGGCGCG CAGCGTCAGG GACGGATCAG CTTCTATATG
ACCTGTACAG GTGAAGAAGC GGCAATCGTC GGCAGTGTCG CGGCGCTGGA CGCTGAGGAC
GTGATCCTCG CGCAATATCG TGAACATGCG GCGCTGCGCT ACCGTGGTTT TACTACTGAG
CAGTTTATGA ACCAAATGTT CAGCAATGAG AAGGACTTAG GTAAAGGTCG CCAAATGCCA
ATTCATTACG GCTGCGCGGC GTTAAACTAC CAAACCATTT CATCGCCACT GGCCACGCAA
ATCCCGCAAG CGACAGGTGT CGGTTATAGC CTGAAAATGC AAGGTAAACG TAATGTCGCT
GTCTGTTATT TCGGTGAAGG CGCTGCGTCT GAAGGTGACT TCCACGCCGG CTTGAATATG
GCTGCGGTGT TAAAATGCCC GGTGATTTTC TTCTGCCGTA ACAATGGTTA TGCCATTTCC
ACCCCAACTG AAGAGCAGTT TGCCGGTAAC GGTATCGCTA GCCGCGGTGT GGGTTACGGT
ATGCACACCA TTCGTGTCGA CGGGAACGAT ATGTTGGCGG TGTTAGCGGC GACGCAACAG
GCGCGTGCCT ATGCAATTGA GCATAATGCC CCCGTGTTAA TTGAAGCCAT GACTTATCGC
CTTGGCGCGC ACTCATCTTC TGACGATCCT TCTGGCTATC GCTCCAAAGA AGAAGAGGCG
AAGTGGCAGC AACACGATCC AGTCAAACGC TTCAAGTTAT GGTTGATCAA CAAAGGCTGG
TTGGCCGAGG CCGATGATGC CCAGTGTTAC GAAAAGTACC GTGAAGAAGT GTTAGCCGCC
GTTAAAGTCG CTGAAAAATT ACCTATCCCT ATGCTGGATG AGATCATTGA AGATGTGTAC
GACAAGCCAA CACCAGCGCT GAAAAAGCAG CTGAGTGAAC TGAAAGAACA CATCAAGAAA
TATCCGCAAT CCTATCCCAA AAGTGCAGGG AGGCTATAA
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| Protein sequence | MSKATLNTDT VHRVGFLDKA SLHIPILRIL QADGTTYETA VLPVIDEALA TKIYDTCVFT
RVLDERMLGA QRQGRISFYM TCTGEEAAIV GSVAALDAED VILAQYREHA ALRYRGFTTE
QFMNQMFSNE KDLGKGRQMP IHYGCAALNY QTISSPLATQ IPQATGVGYS LKMQGKRNVA
VCYFGEGAAS EGDFHAGLNM AAVLKCPVIF FCRNNGYAIS TPTEEQFAGN GIASRGVGYG
MHTIRVDGND MLAVLAATQQ ARAYAIEHNA PVLIEAMTYR LGAHSSSDDP SGYRSKEEEA
KWQQHDPVKR FKLWLINKGW LAEADDAQCY EKYREEVLAA VKVAEKLPIP MLDEIIEDVY
DKPTPALKKQ LSELKEHIKK YPQSYPKSAG RL
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