Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1945 |
Symbol | |
ID | 4258370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2296601 |
End bp | 2297080 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638122608 |
Product | peptide methionine sulfoxide reductase |
Protein accession | YP_737991 |
Protein GI | 114047441 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0225] Peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00147919 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCGTTAG CAACTTTCGG TGCCGGCTGT TTTTGGGGCG TGGAGTATTT CTTTAGACAA GTCAACGGCG TGACCAACGC GACCTGCGGC TATATGGGTG GTAATAACGA CGCGACCACC TATGAGGAAG TCAAAAAAGG CAAAACAGGC CATGCTGAAG TCGTGCAAGT GGAATTTGAC CCTGCGATTG TCAGCTACGA CGAGTTACTT GATGTGTTTT GGAAGAACCA CAATCCCACC ACGCTCAATA TGCAGGGTGG CGATATTGGC ACTCAGTACC GCAGTACTAT TTTCTTCCAT GACCGTGAGC AAAAAGCAAC GGCCGAAGCT TCAAAACTGG CCTTTGCCCG CTCGGGCCGC TGGGGATTAC GCCACATTGT GACTGAAATT GTACCTTTGC AGCAATTCCA TGTGGCAGAG GAATATCATC AAAACTATAT CGATAAGAAC AACTTACCAA GTTGCCATCT CGAGTATTGA
|
Protein sequence | MALATFGAGC FWGVEYFFRQ VNGVTNATCG YMGGNNDATT YEEVKKGKTG HAEVVQVEFD PAIVSYDELL DVFWKNHNPT TLNMQGGDIG TQYRSTIFFH DREQKATAEA SKLAFARSGR WGLRHIVTEI VPLQQFHVAE EYHQNYIDKN NLPSCHLEY
|
| |