Gene Shewmr7_1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1945 
Symbol 
ID4258370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2296601 
End bp2297080 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content49% 
IMG OID638122608 
Productpeptide methionine sulfoxide reductase 
Protein accessionYP_737991 
Protein GI114047441 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00147919 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGTTAG CAACTTTCGG TGCCGGCTGT TTTTGGGGCG TGGAGTATTT CTTTAGACAA 
GTCAACGGCG TGACCAACGC GACCTGCGGC TATATGGGTG GTAATAACGA CGCGACCACC
TATGAGGAAG TCAAAAAAGG CAAAACAGGC CATGCTGAAG TCGTGCAAGT GGAATTTGAC
CCTGCGATTG TCAGCTACGA CGAGTTACTT GATGTGTTTT GGAAGAACCA CAATCCCACC
ACGCTCAATA TGCAGGGTGG CGATATTGGC ACTCAGTACC GCAGTACTAT TTTCTTCCAT
GACCGTGAGC AAAAAGCAAC GGCCGAAGCT TCAAAACTGG CCTTTGCCCG CTCGGGCCGC
TGGGGATTAC GCCACATTGT GACTGAAATT GTACCTTTGC AGCAATTCCA TGTGGCAGAG
GAATATCATC AAAACTATAT CGATAAGAAC AACTTACCAA GTTGCCATCT CGAGTATTGA
 
Protein sequence
MALATFGAGC FWGVEYFFRQ VNGVTNATCG YMGGNNDATT YEEVKKGKTG HAEVVQVEFD 
PAIVSYDELL DVFWKNHNPT TLNMQGGDIG TQYRSTIFFH DREQKATAEA SKLAFARSGR
WGLRHIVTEI VPLQQFHVAE EYHQNYIDKN NLPSCHLEY