Gene Shewmr7_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1942 
Symbol 
ID4258367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2293136 
End bp2293936 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content49% 
IMG OID638122605 
Productalpha/beta hydrolase fold 
Protein accessionYP_737988 
Protein GI114047438 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000178977 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00172948 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTACCACA GCACAGGCGA TTCCATGAAT TTTGCATCCA CAGGTCAAGG AGAAGCAGTC 
CTCCTTATCC ACGGACTCTT TGGCAATTTA GATAATCTTA AGGGGCTAGG ACAAGTCCTC
GAAGCAAATC ATCAGGTTAT CCGCGTTGAT GTGCCTAATC ATGGTTTGAG TGAACATTGG
CAGGAGATGG ATTACCCAAG CTTAGCCGAG GCAATGGTGG CATTGTTAGA TGAACTTGAG
CTTGAACGTG TACACATTGT TGGCCATTCC ATGGGCGGTA AAATCGCCAT GGCAACTGCC
CTTGCCTATC CAGAACGCAT CATCAGCATG GTAGCCGCCG ATATTGCCCC AGTTGCTTAT
CAGCCGCGCC ATGATGCGGT ATTTGCGGCA CTCGAAAGTT TGCCACTTGA AGGCCACACC
GACCGCCGCT TTGCGTTATC GCATTTATTA GCGGGTGGCA TCGATGAACC GACCGCGCAG
TTTTTACTCA AAAACCTCCA GCGCACCGAC ACTGGCTTTC GTTGGAAGAT GAACCTTACT
GGCTTAAAAA GCTGTTATCC CAACATCATT GGTTGGCCTA ATGAAAACCA CAAATCACAG
CAAGTCTATA ACGGACCGAG CCTTTTTATC CGTGGTGGCG ACTCCAATTA TGTGACCGCC
GAACATCGCG ACGAGATCAT GCGCCAATTT CCCGCGGCGC AGGCCAAAAC ATTAGAAGGT
TGCGGCCATT GGCTACATGC TCAAAAGCCT GCCGTGTTTA ATCGTATTGT GTCTGAATTT
ATTGACAAAC ACTCAGTGTA A
 
Protein sequence
MYHSTGDSMN FASTGQGEAV LLIHGLFGNL DNLKGLGQVL EANHQVIRVD VPNHGLSEHW 
QEMDYPSLAE AMVALLDELE LERVHIVGHS MGGKIAMATA LAYPERIISM VAADIAPVAY
QPRHDAVFAA LESLPLEGHT DRRFALSHLL AGGIDEPTAQ FLLKNLQRTD TGFRWKMNLT
GLKSCYPNII GWPNENHKSQ QVYNGPSLFI RGGDSNYVTA EHRDEIMRQF PAAQAKTLEG
CGHWLHAQKP AVFNRIVSEF IDKHSV