Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1937 |
Symbol | |
ID | 4258465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2290080 |
End bp | 2290640 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638122600 |
Product | elongation factor P |
Protein accession | YP_737983 |
Protein GI | 114047433 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
TIGRFAM ID | [TIGR00038] translation elongation factor P |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000886645 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00672321 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAACTG CTCATGAAGT CCGTCCAGGT AACGTGATCA TGTTTGAAGG CAGCCCATGG GTTGTACAGA AAACAGAAAC AACTCGCTCT GGCCGTAACG CTGCTATCGT TAAGTTAAAA CTGAAAAACT TACTGCTTAA CTCAGGCACC GAAACCACTT TCAAAGGTGA AGATAAGATT GACGATATTA TCCTAGATCG TCTGGATTGT ACTTATTCTT ACTTTGCTGA TCCTATGTAC GTGTTCATGG ATGCAGAATA CAACCAATAC GACGTAGAAG CTGAAAACTT AGGTGATGCA GCGGCTTACA TCGTTGACGG TATGGAAGAA ACTTGCCAAG TGACTTTCTA CGAAGGCAAA GCAATTTCTG TTGAAATGCC AACCACTATC GTACGTGAAG TGATCTACAC TGAGCCATCA GCTCGTGGCG ATACTTCAGG TAAAGTAATG AAGCCAGCAA CTATCACTGG CGGCGGTACC ATCAGTGTGG CTGACTTCGT TAAAGTTGGC GACAAGATTG AAATCGACAC TCGTACTGGC GAATTCAAGA AGCGCGTATA A
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Protein sequence | MKTAHEVRPG NVIMFEGSPW VVQKTETTRS GRNAAIVKLK LKNLLLNSGT ETTFKGEDKI DDIILDRLDC TYSYFADPMY VFMDAEYNQY DVEAENLGDA AAYIVDGMEE TCQVTFYEGK AISVEMPTTI VREVIYTEPS ARGDTSGKVM KPATITGGGT ISVADFVKVG DKIEIDTRTG EFKKRV
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