| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1935 |
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| Symbol | |
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| ID | 4258463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2286467 |
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| End bp | 2287681 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638122598 |
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| Product | aminotransferase AlaT |
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| Protein accession | YP_737981 |
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| Protein GI | 114047431 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00236574 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0314212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCTA TCATCAAGTC CAACAAGTTG GATACTGTTT GCTACGACAT CCGCGGCCCA
GTGCACAAGG AAGCCAGACG TTTAGAAGAC GAGGGACACC GCATCCTCAA ACTCAACATT
GGTAACCCCG CCCCCTTCGG TTTTGAAGCG CCGGAAGAAA TTGTGCGCGA TGTGATCCTC
AATCTTCCCA GCGCCCAAGG CTACTGTGAG TCGAAAGGAT TATTCTCTGC CCGCAAGGCG
ATTGTGCAGC ATTATCAAGC TCAAGGAATT TTTGGTGTTG ATATTGAAGA TATCTATATA
GGCAACGGCG TCTCTGAACT TATTATGATG GCGATGCAAG GTCTGCTTAA CACAGATGAT
GAGATCTTAA TCCCCTCGCC TGACTATCCA TTATGGACAG CGGCGGCCAA TCTCGCCGGC
GGTAAAGCGG TGCATTACCG TTGTGATGAA GACGCGGATT GGTTCCCCGA TCTTGATGAT
ATTAAGAGCA AAATTTCATC TCGCACCCGC GGTATTGTAT TGATCAACCC GAACAATCCT
ACTGGCGCGG TTTACAGCAA AGAATTACTG CTGCAAGTTG TCGAGCTTTG CCGCGAGCAC
AACCTGATCC TGTTTGCCGA TGAAATCTAC GATAAGATTT TATACGACGA GGCCAAACAT
ATTCCGGCCG CGAGCCTCTC TGACGATATC TTAACCGTGA CCTTTAATGG TCTATCAAAG
GCTTATCGCG CTGCGGGCTT TCGTGTTGGT TGGATGATGT TGTCTGGTAA TCTTAAGGCT
GCAAAGAGTT ATATCGAAGG TTTAGAGATG CTCTCCTCGA TGCGCCTGTG TGCCAACGTG
CCGAATCAAC ATGCGATTCA AACCGCGCTC GGCGGTTACC AAAGCATTAA TGAGCTGATT
TTACCTAGTG GCCGCTTAAC CGTGCAGCGC GATACCTGTT ATGAGTTATT GAACCAAATT
CCCGGTGTGA GCGTGAAAAA GCCGAAGGGT GCACTCTATG CTTTCCCTAA ATTGGATATG
AAAAAATTCA ACCTTAGGGA TGATGAGCGC TTAGTCCTCG ATTTACTCAG AGAAAAGAAA
ATCCTGTTAG TACACGGCAG TGCCTTTAAC TGGCCAGAGC CGGATCACCT CAGGGTGGTA
TTTTTACCCT ATAAAGAAGA TTTGACTAAG GCATTGACTG AGTTTGGCCA TTTCCTCGAG
ACCTATAAAC AATAA
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| Protein sequence | MRPIIKSNKL DTVCYDIRGP VHKEARRLED EGHRILKLNI GNPAPFGFEA PEEIVRDVIL
NLPSAQGYCE SKGLFSARKA IVQHYQAQGI FGVDIEDIYI GNGVSELIMM AMQGLLNTDD
EILIPSPDYP LWTAAANLAG GKAVHYRCDE DADWFPDLDD IKSKISSRTR GIVLINPNNP
TGAVYSKELL LQVVELCREH NLILFADEIY DKILYDEAKH IPAASLSDDI LTVTFNGLSK
AYRAAGFRVG WMMLSGNLKA AKSYIEGLEM LSSMRLCANV PNQHAIQTAL GGYQSINELI
LPSGRLTVQR DTCYELLNQI PGVSVKKPKG ALYAFPKLDM KKFNLRDDER LVLDLLREKK
ILLVHGSAFN WPEPDHLRVV FLPYKEDLTK ALTEFGHFLE TYKQ
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