Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1932 |
Symbol | |
ID | 4258460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2283586 |
End bp | 2284227 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638122595 |
Product | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase |
Protein accession | YP_737978 |
Protein GI | 114047428 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0107986 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.138776 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTGAGA ATAACTGGTC ACTACAACCA CAAGATATTT TTAAACGCAG CCCTATTGTT CCTGTTATGG TCATTAACAA GATTGAACAT GCGGTGCCGT TAGCTAAAGC CTTAGTTGCT GGCGGGATCA GCGTTTTGGA AGTGACATTA CGTACTCCAT GCGCCCTCGA AGCTATCACT AAGATCGCCC AAGAAGTGCC TGAGGCACTT GTTGGCGCTG GTACCATTTT AAATGAAGCC CAGCTCGATC AAGCGATTGC TGCCGGTGCA CAATTTATTA TTACCCCAGG GGCGACGGTC GAGCTGCTTA AAGCCGGTAT GCAAGGCCCT GTGCCTTTGA TCCCAGGCGT TGCCAGCATC TCCGAAGTGA TGACGGGCAT GGCGCTCGGT TACACTCACT TTAAATTCTT CCCTGCGGAA GCTTCGGGCG GTGTGGATGC GCTCAAAGCA TTCTCTGGCC CATTAGCGGA TATCCGTTTC TGCCCAACGG GTGGTATTAC GCCAAGCAGC TATAAAGATT ACTTAGCGCT GAAAAATGTG GATTGTATCG GCGGCAGCTG GATTGCCCCA ACGGATGCAA TGGAGCAGGG CGATTGGGCG CGTATCACTC AATTGTGTAA AGATGCGATT GGCGGGGTCT AA
|
Protein sequence | MLENNWSLQP QDIFKRSPIV PVMVINKIEH AVPLAKALVA GGISVLEVTL RTPCALEAIT KIAQEVPEAL VGAGTILNEA QLDQAIAAGA QFIITPGATV ELLKAGMQGP VPLIPGVASI SEVMTGMALG YTHFKFFPAE ASGGVDALKA FSGPLADIRF CPTGGITPSS YKDYLALKNV DCIGGSWIAP TDAMEQGDWA RITQLCKDAI GGV
|
| |