| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1909 |
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| Symbol | |
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| ID | 4258648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2253220 |
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| End bp | 2255619 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638122564 |
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| Product | electron transport complex protein RnfC |
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| Protein accession | YP_737955 |
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| Protein GI | 114047405 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
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| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.567258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGACTT TATTAGATCA ATTAGATAAA GGAACCCTTT GGCGCTCACC CGGTGGCATT
CATCCGCCTG AAGTCAAATT CCTCTCCAAC ACTACACCGA TTAGCCAACT GCCATTAGCG
CAGGAATACC TTGTCCCTGT GCCACAGGTA GGCGAAAACT GCACCCTTGC AGTCAAAGTG
GGTGACAAAG TATTAAAAGG CACGCCATTA ACTCAAGGCA CCTCGATTTG GCATTTGCCC
GTACATGCGC CAACCTCTGG CACGGTGGTA GCCATTGAGC CAAGAGCCAG TAACCACGCC
TCAGCCTTGC CAGTCAATAC CTGCGTGATT GCCGCCGATG GTGAAGACCG CTGGTGCGAG
TTAACGCCAG GCTCAATTGA GCTTAGCAAT CATGAGATGA TTGCCAAAAT CCATGGCGCA
GGCATTGCGG GTATGGGCGG CGCCGCCTTT CCAAGCCATA TCAAGCTGAA TCCTGTCAGT
GAAATCGAAT TAGTGATTAT CAATGGCGTG GAATGTGAGC CTTATATCAG CGCCGACGAT
CGCTTAATGC GCGAATACAG CCAAGACATT CTGGCGGGTA TTGGGATTAT CCATCGTCTC
CTCGCGCCCA AGCGTATTGT GATTGCTATC GAAGACAACA AGCCCGAAGC CATCAAAGCC
ATGCAACAGG CGGTGAGTCA ATCCACGCTC CCTGCGGGCA GCACGCGAGT GACGGCGATA
CCAACTAAAT ATCCTTCTGG CGGTGAAAAG CAGCTTATTC AGATCATCAC TGGGCGTGAA
GTGCCCTCTG GCTCCATCCC CGCTAAGCTT GGGATTGTCG TGCATAACGT GGGAACCGCG
TTTGCGATTC ACCAAGCCGT GATCCAAGGT AAACCACTGA TTGAACGTGT GGTTACCGTT
ACCGGGCAAA ATGTCGGTAA GCCCGGCAAC TATTGGTTAC CCATAGGCAC GCCCGTTGAA
CATGTGCTCA AACATACTGA ATTTCACGCC GAAGCCGATC AAAAAGTGAT TATTGGCGGT
CCTATGATGG GCCATGCGTT ACCCACCATC CAAGTGCCGA TTTTAAAGGG CACAAACTGT
ATTTTGGTGC CCAGCAGTCA AGAAATTGGA ACCACTCCAG AGGAAAAGGC CTGTATCCGC
TGCGGCGAAT GTGCCAATGC CTGCCCTGCA CTCTTGCTAC CACAACAACT GTTTTGGCAT
GCAAAAGCCG AAGAATATGA CAAGGCGGCC AGCTACAACC TTAAAGATTG CATAGAATGC
GGTTGCTGTA GTTATGTGTG TCCCAGTGAT ATTCCACTGG TGGAATACTA TCGCATCGCT
AAATCGGCAC TAAAACAAGC CGCCGATGAG AAACATCAAG CCGAGCGCGC CAAACTGCGC
TTCGAGGCGC GTATTCAACG CCTCGAAGAA GAAAAACTCG CCCGCGAAGC CAAGGCTAAG
GAAGCCGCAG CGCGTCGCCA AGCAACCATG ACCTCAACGG ATAAAAATGC CGTTGCCGAA
GCTATGGCGC GGATCGCGGC CAAAAAGGCA GCAGCGGCAG AAAACACCGC CGATAACGCG
CCAGCCGAAG TCGTGAATGC TGATGCAAAC AGCACTGAGG CACCTAAGGG TAAAGCAGCC
GTAGCCGCCG CGATTGCCCG AGCTAAAGCC AAGAAAGCCG CCGCTGCGGC TCAAGGGGCG
GATGATGCAG TCTCTTCTGA ACAAACGGTA TCTTCTGAGC AAAACGAACC AACTGAGCAG
GCTGAGACGT TATCGCAAAA AGATAAAGTC GCCGCAGCTA TCGCTCGCAC CAAAGCGAAA
AAAGCGGCGT TAAAGGCCGA CTCGGATGCC AATGGTGACA CTGACGCCGC GACAGGCAAC
ACAGATAAGC CAGCAACAGA AACGACGGCT AACACGGAAG TGGATGACAA AAAAGCCAAG
GTCGCTGCCG CCGTTGCTCG CGCAAAAGCC AAAAAGGCCG CCGCACAGCA GGCTGAATTG
ACTGAGGTTA CCGAAGTTCA GCTCGAGTTA GTCGCAGATG CTAAGCCAGA ATCAGAGTCA
GGCTCTATTC CAAGTGCGCC ACTCAGTCCT GAAGATGAGA AAAAGGCCAA GATCGCTGCG
GCCGTTGCCC GCGCGAAAGC CAAAAAAGCC GCCGCGCAGC AGGCTGAGTC GACTGAGGTT
ACCGAAGTTC AGCCCGAGTT AGTAGCAGTT GCTAAGCCGG AATCAGACAT TGAGTCAGGT
TCTGAACCAG ACTCTGAATC AGACAATGAA TCAGGCAATA AATCAAGCTC AGTCGCAGAA
CCAAGCGCGC CACTCAGTCC CGAAGATGAG AAGAAAGCCA AGGTCGCTGC TGCCGTTGCC
CGCGCGAAAG CCAAAAAAGC GGCCAGAGAA GCGAATGCGA TCAGCGACGC AAATGAATAG
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| Protein sequence | MLTLLDQLDK GTLWRSPGGI HPPEVKFLSN TTPISQLPLA QEYLVPVPQV GENCTLAVKV
GDKVLKGTPL TQGTSIWHLP VHAPTSGTVV AIEPRASNHA SALPVNTCVI AADGEDRWCE
LTPGSIELSN HEMIAKIHGA GIAGMGGAAF PSHIKLNPVS EIELVIINGV ECEPYISADD
RLMREYSQDI LAGIGIIHRL LAPKRIVIAI EDNKPEAIKA MQQAVSQSTL PAGSTRVTAI
PTKYPSGGEK QLIQIITGRE VPSGSIPAKL GIVVHNVGTA FAIHQAVIQG KPLIERVVTV
TGQNVGKPGN YWLPIGTPVE HVLKHTEFHA EADQKVIIGG PMMGHALPTI QVPILKGTNC
ILVPSSQEIG TTPEEKACIR CGECANACPA LLLPQQLFWH AKAEEYDKAA SYNLKDCIEC
GCCSYVCPSD IPLVEYYRIA KSALKQAADE KHQAERAKLR FEARIQRLEE EKLAREAKAK
EAAARRQATM TSTDKNAVAE AMARIAAKKA AAAENTADNA PAEVVNADAN STEAPKGKAA
VAAAIARAKA KKAAAAAQGA DDAVSSEQTV SSEQNEPTEQ AETLSQKDKV AAAIARTKAK
KAALKADSDA NGDTDAATGN TDKPATETTA NTEVDDKKAK VAAAVARAKA KKAAAQQAEL
TEVTEVQLEL VADAKPESES GSIPSAPLSP EDEKKAKIAA AVARAKAKKA AAQQAESTEV
TEVQPELVAV AKPESDIESG SEPDSESDNE SGNKSSSVAE PSAPLSPEDE KKAKVAAAVA
RAKAKKAARE ANAISDANE
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