| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1887 |
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| Symbol | |
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| ID | 4256846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2226242 |
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| End bp | 2227876 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638122542 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_737933 |
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| Protein GI | 114047383 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.374169 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTTG AAGAATCCTT AGAACAACTA AAACGTCAGT ACTTACATGC ACTACCCGAT
AAGAAGAAAC AAATTATCAC CCTGTGGATC TCGCTTCGAA AAAACTGGCA GAGCCATATG
CTGTCGGCGG TCTACCGTGA AGTCCATAAC TTAAAAGGCT CCTGCGAAAC TTTTGGCCTT
ACCGACACCA AAGAGATTGT CGATAAGCTT GAGCTGCTGT TAAAAAATTT ACTCGATTCG
CCCGCCCCTG CGCTGAATGT GATCAAAAGC TTAGATACCC TCTTTCACCA GCTGCTGCAA
AATAACCTCC GTGGTGAGCC AGCGGCCCCC GTGGTTGAAG CGCAAATGCA GCACAGCCCC
TATAAACCGA CAAAAGCACG GCACGAGTAT CGAATAGCAA TTATTGAGGA TGACAATAAT
GTCGGGGCGA TGATAACGAA GCAGCTGCAT GAGTTTGGTT TTAATGTGCA GCACTTTTTA
AATTTCACCG ACTTCCTCGA AATTCAAAAT ACCTCGCCCT TCGATTTGAT TTTATTAGAT
CTCATCTTGC CCGATTATAC CGAAGAAGCC TTATTTACCG CGGCGACCGA GTTTGAGAAA
CACAATACCC GTGTGTTTGT TCTCTCTTCC CGCGGTGATT TTGAGATGCG ACTGCTAGCG
ATCCGCGCCA ATGTCAGTGA GTATTTTGTT AAACCCGCCG AAACCACCCT ACTGGTACGC
AAGATCCACC AGTGGCTCAA AATGTCAGAA AAACAGCCGC TTAAAATTTT GCTGGTGGAT
GATCAGCAAT CCATGGTCGA TTATTTTTCC AGCCTGCTTC GCAGTCATGG GCTGATGGTA
AAAGGCATGA CCAAACCCGA GCAAGTACTG CCAACCCTAG AGCAATTTGA GCCAGATCTG
TTTATTTTCG ATTTGTATAT GCCCGATGTG AATGGTTTAG AGTTGGCGAA AATGATCCGC
CAATTAGATA AATACAGCTC AAGCCCTATC CTAGTGCTCA GCTCCGACGA CACTATGCAG
AACAAGGTCA GCATCATTCA GGCGGGGTCC GACGATTTAA TCTCAAAACA AACCGCGCCG
AGTTTGTTCG TGACGCAAGT GATTTCCCGC GCCCAGCGTG GCCATGATAT TCGAAGCTCC
GCCAGCCGCG ATAGCTTAAC GGGCCTGCTT AATCACACCC AGATCCTCGT TGCTGCCCGC
CGCTGTTTTA ACCTCGCCAA ACGTATCAAC TCCTCGGTGT GCATTGCCAT GCTGGACTTA
GATCACTTTA AGCAAGTGAA TGATACCTAT GGGCATTCTG GCGGCGACAA AGTGCTGTTG
GCCTTTGCCC ATCTGTTGCA GCAATCCCTG CGCCCCGTGG ATTTTATGGG TCGTTACGGC
GGCGAAGAAT TTATGCTGGT CTTACCCGAT CTGCCCGCCC CCTTAGCCAT TGCTAAGCTT
AATGCTATTC GCGAGAGCTT TAGCCATATT GTGTTTGTCG AAGATGCCGC CGAATTTAAA
GTCACCTTAA GCGGAGGGTT AGCCTTCTCG GCCGAATGCG GCGAGTTTCA AGATTGTTTA
TTACTAGCGG ATAAAAATCT GTATGAGGCA AAACGTACTG GACGTAACCG TTTGATCACT
AACTTAATAA AATAA
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| Protein sequence | MSLEESLEQL KRQYLHALPD KKKQIITLWI SLRKNWQSHM LSAVYREVHN LKGSCETFGL
TDTKEIVDKL ELLLKNLLDS PAPALNVIKS LDTLFHQLLQ NNLRGEPAAP VVEAQMQHSP
YKPTKARHEY RIAIIEDDNN VGAMITKQLH EFGFNVQHFL NFTDFLEIQN TSPFDLILLD
LILPDYTEEA LFTAATEFEK HNTRVFVLSS RGDFEMRLLA IRANVSEYFV KPAETTLLVR
KIHQWLKMSE KQPLKILLVD DQQSMVDYFS SLLRSHGLMV KGMTKPEQVL PTLEQFEPDL
FIFDLYMPDV NGLELAKMIR QLDKYSSSPI LVLSSDDTMQ NKVSIIQAGS DDLISKQTAP
SLFVTQVISR AQRGHDIRSS ASRDSLTGLL NHTQILVAAR RCFNLAKRIN SSVCIAMLDL
DHFKQVNDTY GHSGGDKVLL AFAHLLQQSL RPVDFMGRYG GEEFMLVLPD LPAPLAIAKL
NAIRESFSHI VFVEDAAEFK VTLSGGLAFS AECGEFQDCL LLADKNLYEA KRTGRNRLIT
NLIK
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