Gene Shewmr7_1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1886 
Symbol 
ID4256845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2224954 
End bp2226009 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content51% 
IMG OID638122541 
Productresponse regulator receiver modulated CheB methylesterase 
Protein accessionYP_737932 
Protein GI114047382 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.187524 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATAA AAGTACTGGT GGTTGATGAT TCGGCATTGA TCCGTAACTT ATTGGGCAAG 
ATGATCGAGG CCGATAGCGA ACTTTCCCTA GTTGGCATGG CCGCCGATGC CTATATGGCC
AAGGATATGG TGAATCAGCA TCGCCCCGAT GTGATTACTT TAGATATTGA AATGCCTAAA
GTGGATGGCT TGACCTTTTT AGACCGCTTA ATGAAGGCTA GACCCACGGC GGTGGTGATG
ATTTCGTCGT TAACCGAAGA AGGCGCTGAC GCTACATTTA ACGCGCTCGC CCTCGGGGCG
GTGGACTTTA TCCCTAAGCC GAAATTAGAT TCGCCCCAGG ATTTTAATGA ATACCAAGAT
TTAATTTTGG AGAAAATTAA ATCGGCCGCC CACGCTAAAC TGAAAACCCA ACGAGCTGCA
CCTGCCGTCG TGGTTCAACC TAGCCATAAA CCCGCGCTGA GTAACCGTGT GATCAACACA
CAATTGGTGG CAATCGGCGC CTCCACTGGC GGTACCGAAG CCATTTTGTC GCTGTTACAA
CAGTTTCCGG CGGTGATGCC ACCGATTGTG ATCACCCAAC ATATGCCACC GGGCTTTACT
CGCACCTTTG CTGAGCGGCT AAATAAACTT ACCCGTTTGA ATGTCAAACA GGCCGAAGAT
GGTGAACGTT TGCTGCCCTG TTATGTGTAT ATTGCGCCTG GGGATCAGCA TTTAGAAGTG
ATTAAGGTCG GCGGCAGTTT TAAGACCCGC TTGACCCAGG GCGACAAGGT GAGTGGCCAT
AGACCCTCGG TAGATGTGCT ATTTAACTCG GTTGCCGAGT GCGCGGGGGC CAATACCACT
GCGGCGATTT TGACTGGCAT GGGCAAAGAT GGCGCCGATG GGATGGCGTT AATCGATGAA
CAGGGCGGTA AAACCTTTGC GCAGGGAGAG CAAAGCTGTG TGGTGTTTGG CATGCCAAGG
GAAGCGATCA AACGCGGCGT TATCCATCAT GTCGTCGAAC TGCCGCAACT GGCGGATAAG
ATGCTCAATT ATTTAGCCTC GCTTAAGCGA GACTAA
 
Protein sequence
MTIKVLVVDD SALIRNLLGK MIEADSELSL VGMAADAYMA KDMVNQHRPD VITLDIEMPK 
VDGLTFLDRL MKARPTAVVM ISSLTEEGAD ATFNALALGA VDFIPKPKLD SPQDFNEYQD
LILEKIKSAA HAKLKTQRAA PAVVVQPSHK PALSNRVINT QLVAIGASTG GTEAILSLLQ
QFPAVMPPIV ITQHMPPGFT RTFAERLNKL TRLNVKQAED GERLLPCYVY IAPGDQHLEV
IKVGGSFKTR LTQGDKVSGH RPSVDVLFNS VAECAGANTT AAILTGMGKD GADGMALIDE
QGGKTFAQGE QSCVVFGMPR EAIKRGVIHH VVELPQLADK MLNYLASLKR D