| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1885 |
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| Symbol | |
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| ID | 4256844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2224330 |
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| End bp | 2224950 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638122540 |
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| Product | chemoreceptor glutamine deamidase CheD |
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| Protein accession | YP_737931 |
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| Protein GI | 114047381 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.182663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCAAAGC CGAATATTGA ATACCCTGTT ATCGAGCCGA ATCGCTATTT TGATCATCAT
TTTGGCTGTG AAGCGGTAAA AATTCTACCG GGAGAATTTT ACGCCACACG GGACCAAACC
ATGATAGTCA CAGTGTTAGG CTCATGTGTG TCCGTTTGCC TCTCCGATCC TGAATTAAAA
ATTGGGGGGA TGAATCATTT TTTATTACCG AGTGACAACG GCAACAGTTC GGGAATATTA
GCAGATTCAG CTCGTTATGG TGTGTACGCC ATGGAGTTAT TGATCAATGA GTTGCTCAAA
CTGGGGGCGC GGCGCCGTGC CTTGGTCGCT AAAGTGTTTG GGGGTGGAAA TATGCTTAAC
GGGATCACCA CCCATAATAT CGGCGAGCGT AATTCGGAGT TTGTGCTCGA ATATTTGCAG
CTTGAGCAAA TCCCGATACT GGCCGCAGAC TTACTCGATT ATTATCCTCG AAAGGTATAT
TTTTTTCCGG CGACAGGTTT AGTAAAAGTT AGAAAAATCA GAACAATGCA TAATAGCACC
ATTATGGACA GGGAAAGTGA GTATCGCCTA AGGATCAGGA ATTTGCCGAG TGGCGGAGAT
GTGGAACTCT TTGGTGACTA A
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| Protein sequence | MPKPNIEYPV IEPNRYFDHH FGCEAVKILP GEFYATRDQT MIVTVLGSCV SVCLSDPELK
IGGMNHFLLP SDNGNSSGIL ADSARYGVYA MELLINELLK LGARRRALVA KVFGGGNMLN
GITTHNIGER NSEFVLEYLQ LEQIPILAAD LLDYYPRKVY FFPATGLVKV RKIRTMHNST
IMDRESEYRL RIRNLPSGGD VELFGD
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