Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1879 |
Symbol | |
ID | 4256838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2216697 |
End bp | 2218400 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638122534 |
Product | response regulator receiver protein |
Protein accession | YP_737925 |
Protein GI | 114047375 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.686257 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTAAAA GCCAACGTTA TATTCTGGTC ATTGATGATG ACTTAGTCAC AAACCAAATT CTTACGGCGT TTATTCACAG TAAAGGGTGG GGGGTGATCA CTTGCTGTAA TCTAGAAGAA GCTTATGAAG AAATTAACCA GCAAAATATC GAGCTTATTT TATTAGACTA TTATTTGCCC GATGGTACCG CACTAACCTT ACTAGAAAGA TTGCGATACC GTGAGCCAAC CGTCCCTGTT ATTGTGATAA GTGCGGATAA TGAATATCAA AAGATATTAT CCTGCTTTCG GTTAGGCGCC TTAGATTTTA TTATTAAACC GATTAATTTA GAACTCTTCT GGCATAAAGT TGAAGGGCTT TTAGCGCATT TTTCCTTAGA GAAACAAGTT AAGCAGCAAC GTTCAATATT GGAAAAAATG TTGTATCAAA AAGCCCGCGA AGAACAAATG GCAAGGCATT TATTTGAGCA TCTCGTTAAT ATTCGCAATG CCAGCTTTGA TTTCGTTAAA TCCTTTACCC AAGCCAGTGC TAATTTTAGC GGCGATATTA TTCTTAATAC CGTTGGTCCC AACGGAAATT TCTTTTTAAT TATTGCGGAT TCGACTGGCC ATGGATTAAG CGCGGCTATG CCGATTTTGC GGGTGGCCAA TACCTTTAGG GCCATGGTTG CGAAAGGCTT TAATCTCGTC AGTTTGATTT ATGAACTTAA TGCCAACGTA TATGAAGATA GCCCTGGCGA TCGTTTTGTG GCGGCCGTCG TTTTAGAGAT AGATTTCTTT AAAAATCAAA TCAATCTTTG GAATGGCGGC ATGCCGGATG CATTGCTTTA TCAAGATGAA TTGGAAAGCG ATTCGGCTTA TGCTGAGCAT GATCACATAC AGAAATACCG CTCTAAAAAC ATGGCGTTAG GGATTTTATC TCCCAGTGCA TTTGTGGCCA ATATTGCCAC TTTTCCCATT CCGCGTACGG GCCGGATCTG TTTACTCAGT GACGGGTTAA TTGAGCAGCA GAGTAAGAGC AAAGGCGGCG CATTTTTTGG TATGGATAGC GTGATTTCGC TGCTGAGTTT CTATGGCCGC GATTTAACCG AATACCTAAG AACAAAACTC ACAACCATTT TTGAACATGA GATCACAGAT GATATTGCGG TCTGTGTACT CGATTTTGAG TTATTACATA ATTGGTATCG AGAACGAGAA CATAAATCGA GTCAAATTTG TATGCGGGGA GAGTTTGCAT GGGCCATTAA AATGATGGGG GCCATGTTGT TGAATGTGGA TTATTTAAAT TCACTGAATC AGTTTTTGAA TATTTTTGGG TTTTCTACTA CGTTTAGTCA GAGAGTATTT ACTGTTGTTT CTGAGTTAGT TACTAACGCA GTTGACCATG GTGTACTCAA GTTAGACTCT CGTCTTAAAA ATGATCCTGA ACGTTTTGAG TTATATCACA GTATACGTGA AAGCAGCATC GACAAGCTTA AGGCTGAAGA TTGGGTCAAA GTTGAGCTTG AATGGCATGC GCAACTCAGC GAACTTTGGA TTAGCGTTTC AGACAGTGGA GAGGGTTATC TTCCTAATGA GCAGGAGGCA ATAACAGATT GGTTTCAAAT TTCGGGTCGT GGGCTTTTAT TGGTGAAATC CCTCTCTAAG AGCTATGAAT TAGTGGCTCC AGGAAATAAA ACTAAAGTCA TAATGGAATG GTAG
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Protein sequence | MPKSQRYILV IDDDLVTNQI LTAFIHSKGW GVITCCNLEE AYEEINQQNI ELILLDYYLP DGTALTLLER LRYREPTVPV IVISADNEYQ KILSCFRLGA LDFIIKPINL ELFWHKVEGL LAHFSLEKQV KQQRSILEKM LYQKAREEQM ARHLFEHLVN IRNASFDFVK SFTQASANFS GDIILNTVGP NGNFFLIIAD STGHGLSAAM PILRVANTFR AMVAKGFNLV SLIYELNANV YEDSPGDRFV AAVVLEIDFF KNQINLWNGG MPDALLYQDE LESDSAYAEH DHIQKYRSKN MALGILSPSA FVANIATFPI PRTGRICLLS DGLIEQQSKS KGGAFFGMDS VISLLSFYGR DLTEYLRTKL TTIFEHEITD DIAVCVLDFE LLHNWYRERE HKSSQICMRG EFAWAIKMMG AMLLNVDYLN SLNQFLNIFG FSTTFSQRVF TVVSELVTNA VDHGVLKLDS RLKNDPERFE LYHSIRESSI DKLKAEDWVK VELEWHAQLS ELWISVSDSG EGYLPNEQEA ITDWFQISGR GLLLVKSLSK SYELVAPGNK TKVIMEW
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