Gene Shewmr7_1879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1879 
Symbol 
ID4256838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2216697 
End bp2218400 
Gene Length1704 bp 
Protein Length567 aa 
Translation table11 
GC content40% 
IMG OID638122534 
Productresponse regulator receiver protein 
Protein accessionYP_737925 
Protein GI114047375 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.686257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTAAAA GCCAACGTTA TATTCTGGTC ATTGATGATG ACTTAGTCAC AAACCAAATT 
CTTACGGCGT TTATTCACAG TAAAGGGTGG GGGGTGATCA CTTGCTGTAA TCTAGAAGAA
GCTTATGAAG AAATTAACCA GCAAAATATC GAGCTTATTT TATTAGACTA TTATTTGCCC
GATGGTACCG CACTAACCTT ACTAGAAAGA TTGCGATACC GTGAGCCAAC CGTCCCTGTT
ATTGTGATAA GTGCGGATAA TGAATATCAA AAGATATTAT CCTGCTTTCG GTTAGGCGCC
TTAGATTTTA TTATTAAACC GATTAATTTA GAACTCTTCT GGCATAAAGT TGAAGGGCTT
TTAGCGCATT TTTCCTTAGA GAAACAAGTT AAGCAGCAAC GTTCAATATT GGAAAAAATG
TTGTATCAAA AAGCCCGCGA AGAACAAATG GCAAGGCATT TATTTGAGCA TCTCGTTAAT
ATTCGCAATG CCAGCTTTGA TTTCGTTAAA TCCTTTACCC AAGCCAGTGC TAATTTTAGC
GGCGATATTA TTCTTAATAC CGTTGGTCCC AACGGAAATT TCTTTTTAAT TATTGCGGAT
TCGACTGGCC ATGGATTAAG CGCGGCTATG CCGATTTTGC GGGTGGCCAA TACCTTTAGG
GCCATGGTTG CGAAAGGCTT TAATCTCGTC AGTTTGATTT ATGAACTTAA TGCCAACGTA
TATGAAGATA GCCCTGGCGA TCGTTTTGTG GCGGCCGTCG TTTTAGAGAT AGATTTCTTT
AAAAATCAAA TCAATCTTTG GAATGGCGGC ATGCCGGATG CATTGCTTTA TCAAGATGAA
TTGGAAAGCG ATTCGGCTTA TGCTGAGCAT GATCACATAC AGAAATACCG CTCTAAAAAC
ATGGCGTTAG GGATTTTATC TCCCAGTGCA TTTGTGGCCA ATATTGCCAC TTTTCCCATT
CCGCGTACGG GCCGGATCTG TTTACTCAGT GACGGGTTAA TTGAGCAGCA GAGTAAGAGC
AAAGGCGGCG CATTTTTTGG TATGGATAGC GTGATTTCGC TGCTGAGTTT CTATGGCCGC
GATTTAACCG AATACCTAAG AACAAAACTC ACAACCATTT TTGAACATGA GATCACAGAT
GATATTGCGG TCTGTGTACT CGATTTTGAG TTATTACATA ATTGGTATCG AGAACGAGAA
CATAAATCGA GTCAAATTTG TATGCGGGGA GAGTTTGCAT GGGCCATTAA AATGATGGGG
GCCATGTTGT TGAATGTGGA TTATTTAAAT TCACTGAATC AGTTTTTGAA TATTTTTGGG
TTTTCTACTA CGTTTAGTCA GAGAGTATTT ACTGTTGTTT CTGAGTTAGT TACTAACGCA
GTTGACCATG GTGTACTCAA GTTAGACTCT CGTCTTAAAA ATGATCCTGA ACGTTTTGAG
TTATATCACA GTATACGTGA AAGCAGCATC GACAAGCTTA AGGCTGAAGA TTGGGTCAAA
GTTGAGCTTG AATGGCATGC GCAACTCAGC GAACTTTGGA TTAGCGTTTC AGACAGTGGA
GAGGGTTATC TTCCTAATGA GCAGGAGGCA ATAACAGATT GGTTTCAAAT TTCGGGTCGT
GGGCTTTTAT TGGTGAAATC CCTCTCTAAG AGCTATGAAT TAGTGGCTCC AGGAAATAAA
ACTAAAGTCA TAATGGAATG GTAG
 
Protein sequence
MPKSQRYILV IDDDLVTNQI LTAFIHSKGW GVITCCNLEE AYEEINQQNI ELILLDYYLP 
DGTALTLLER LRYREPTVPV IVISADNEYQ KILSCFRLGA LDFIIKPINL ELFWHKVEGL
LAHFSLEKQV KQQRSILEKM LYQKAREEQM ARHLFEHLVN IRNASFDFVK SFTQASANFS
GDIILNTVGP NGNFFLIIAD STGHGLSAAM PILRVANTFR AMVAKGFNLV SLIYELNANV
YEDSPGDRFV AAVVLEIDFF KNQINLWNGG MPDALLYQDE LESDSAYAEH DHIQKYRSKN
MALGILSPSA FVANIATFPI PRTGRICLLS DGLIEQQSKS KGGAFFGMDS VISLLSFYGR
DLTEYLRTKL TTIFEHEITD DIAVCVLDFE LLHNWYRERE HKSSQICMRG EFAWAIKMMG
AMLLNVDYLN SLNQFLNIFG FSTTFSQRVF TVVSELVTNA VDHGVLKLDS RLKNDPERFE
LYHSIRESSI DKLKAEDWVK VELEWHAQLS ELWISVSDSG EGYLPNEQEA ITDWFQISGR
GLLLVKSLSK SYELVAPGNK TKVIMEW