| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1875 |
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| Symbol | |
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| ID | 4256834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2210578 |
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| End bp | 2212161 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638122530 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_737921 |
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| Protein GI | 114047371 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.994657 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTCAGC AAGTGATGAC TGGGCAAGAC CATGCCCCAA CGGAGGGCGT GAATTCGAGC
GATGTTTTAC ACACCGATAC TAAACCTAAG TCTGAGCAAC ACCTTGGGTT TATCACGCTT
TCGGTGATGC TAGCGACCAT TATGCAAGCG CTGGATACTA CGATTGCCAA CGTGGCCTTG
CCCCATATGC AGGGCAGCAT GGGGGCGACT CAGGATCAAA TCTCTTGGGT GTTAACCTCC
TATATTGTGG CCGCAGCGAT TTTTATGCCG CTGACGGGGT TTTTAACCGC GAGGCTTGGG
CGTAAACGGG TATTTATGTG GGCTGTGGTG GGCTTTACGA TTGCCTCCAT GCTCTGCGGC
GCTGCGCAAA ACCTTGAGCA AATTGTGTTA TTTCGCTTAT TGCAAGGAGT GTTTGGTGCC
AGCTTAGTGC CTTTATCCCA ATCGGTATTA CTTGACAGTT ACCCGCCAGA GCGCCATGGT
TCGGCCATGG CCCTTTGGGG AGTGGGGGTG ATGGTCGGGC CGATTTTGGG GCCATCCCTC
GGTGGTTGGT TAACTGAGTA TTACAACTGG CGCTGGGTGT TCTATATCAA CCTGCCTTTT
GGGCTTTTAG CCTGGTTTGG TCTTGCCGCC TATGTGAAAG AAACGCCGCT GGACCATAGC
CGTAAGTTCG ATTTACTCGG TTTTGCCATG TTGAGTCTGG CCATTGGCGC CTTGCAAATG
TTGCTCGATA GGGGAGAATC CCTCGATTGG TTTTCTAGTC GCGAAATTGT TATCGAAGCC
ATTATTGCTG GCATGGCGTT TTATTTGTTT GTGGCCCATA TCTTTACCCA TAAACATCCC
TTTATTGAGC CCGGGCTGTT TAAGGACAGA AACTTCAGTG TGGGACTTAT CTTCATCTTT
ATCATTGGGA TTATTCTGCT GGCGACCATG GCCTTACTGC CGCCGTTTAT GCAGAACCTG
TTAGGTTATC CTGTGATTGA TGTGGGTTAC CTGCTGGCGC CAAGGGGCGT CGGCACTATG
ATCGCCATGA TGACGGTGGG TAAGCTCGCC GGCAAAGTGG ATGTGCGTTA CCAAATCTTT
TTAGGTTTGA TGCTCACTAT TTTGTCTCTA TGGGAGATGA CGGGTTTTAA CACCAATATT
ACCAGCTGGG ACATAGTGCG CACTGGGATT ATTCAAGGCC TTGGCTTAGG GTTTATCTTT
GTACCGCTCT CGACCATTAC CTTTGCAACC TTAGCGGCGA AATACCGTAA TGAGGGGACT
GCGCTCTTTA GTCTGATGCG AAATATCGGC AGCAGCATAG GGATCTCCGT GGTGATCACC
TATCTTGCCC AGCACACACA GATGAATCAT GCGGTGTTTG CCGATTACAT TCATCCCTTT
AGTTTTGCTT TGCAACATGC TGTTGATGTT CATGCCGTTG ATTTATCGAC GACACAGGGC
GTAGCCTTAC TCAATGCCGA AGTGAATCGT CAGGCGGCTA CCTTGGCCTA TTTGCAGGAC
TTTAGGTTAA TGATGTGGGT GACGTTATCC GCCGTGCCCT TAGTGTTTCT GCTTAAAGGC
GTGCATAAAA AACCAAAGCA TTAA
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| Protein sequence | MSQQVMTGQD HAPTEGVNSS DVLHTDTKPK SEQHLGFITL SVMLATIMQA LDTTIANVAL
PHMQGSMGAT QDQISWVLTS YIVAAAIFMP LTGFLTARLG RKRVFMWAVV GFTIASMLCG
AAQNLEQIVL FRLLQGVFGA SLVPLSQSVL LDSYPPERHG SAMALWGVGV MVGPILGPSL
GGWLTEYYNW RWVFYINLPF GLLAWFGLAA YVKETPLDHS RKFDLLGFAM LSLAIGALQM
LLDRGESLDW FSSREIVIEA IIAGMAFYLF VAHIFTHKHP FIEPGLFKDR NFSVGLIFIF
IIGIILLATM ALLPPFMQNL LGYPVIDVGY LLAPRGVGTM IAMMTVGKLA GKVDVRYQIF
LGLMLTILSL WEMTGFNTNI TSWDIVRTGI IQGLGLGFIF VPLSTITFAT LAAKYRNEGT
ALFSLMRNIG SSIGISVVIT YLAQHTQMNH AVFADYIHPF SFALQHAVDV HAVDLSTTQG
VALLNAEVNR QAATLAYLQD FRLMMWVTLS AVPLVFLLKG VHKKPKH
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