Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1847 |
Symbol | |
ID | 4257261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2170321 |
End bp | 2171361 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638122505 |
Product | LacI family transcription regulator |
Protein accession | YP_737896 |
Protein GI | 114047346 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCGA AAGCGACCTC AATCGATATT GCTTATCGTG CTGGTGTATC CCAGTCTACG GTTTCCCGAG CCTTGAGAAA TAGTCCGTTA GTCAATTTAG AAACCCGTCA GCGGATCCAA GCGATTGCCA AGGAACTCAA TTACAAAGTC GATAAAAACG CCAGTAACCT GCGCACTCAA AACAGCCATA CCTTAGCCCT GTTGTTGTGT GAAGATCCCA CCAATGATGA TTCACTCATC AACCCATTCT TTCTGTCGAT GTTAGGTTCA ATCACGCGGG CGACGGCGCA ACAAGGTTAT GATTTACTGG TGTCATTTCA ACAACTTTCC AGCGATTGGC ATGCCGATTA CGAAGACAGC AATAAAGCCG ATGGCATTAT CTTGTTGGGG TACGGCGATT ATATGGATTA CGAGCAGAAG CTCGAAAAGT TGTTGGCACA GAACACCCAC TTTGTGATTT GGGGCGCCGA GCATAACAAT AAATCCGTGC TATCCATCGG CTGCGATAAT CATCAAGGTG GTTTGATTGC CACTGAACAT CTTATTTCCC TTGGTCGTAA AGCCTTTGCC TTTTTAGGGG ATGCGTCGAG CCATAGCCCC GAGTTTAGGG ACAGATATCT AGGCCATGTC AAAGCGCTGC AAACCGCAGG ATTACCCGTG GTGGCCGCAA GGCAAATCTC GGCCATTAGC ACCGAAAGTG CCGGTTATGA TGCGGCGATG GCGCTGCTTG AGAGCGGACT GAGTGTCGAT GCGATTTTTG CCGCCAGTGA TTTAATCGCC ATTGGTGCGA TTCGCGCCTT AAAAGAGAAA GGGATCTTGG TACCCGAGCA AGTCGCCGTG GTGGGATACG ATGATATTCC CGTGGCAAGC TTTGCCAATC CGCCGCTAAC GACGATTAAG CAAAATACCC AGTTAGCGGG TGAGATTTTA GTGGAAAGCC TACTCAAGCT TATTCGTGGT CAAGCTGTGA CCCCGCAATT AATCCCAACG ACCTTAGTGG TACGCAGCTC CTGCGGGATT GATCATACGC CGCTCGCTTG A
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Protein sequence | MASKATSIDI AYRAGVSQST VSRALRNSPL VNLETRQRIQ AIAKELNYKV DKNASNLRTQ NSHTLALLLC EDPTNDDSLI NPFFLSMLGS ITRATAQQGY DLLVSFQQLS SDWHADYEDS NKADGIILLG YGDYMDYEQK LEKLLAQNTH FVIWGAEHNN KSVLSIGCDN HQGGLIATEH LISLGRKAFA FLGDASSHSP EFRDRYLGHV KALQTAGLPV VAARQISAIS TESAGYDAAM ALLESGLSVD AIFAASDLIA IGAIRALKEK GILVPEQVAV VGYDDIPVAS FANPPLTTIK QNTQLAGEIL VESLLKLIRG QAVTPQLIPT TLVVRSSCGI DHTPLA
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