| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1830 |
|---|
| Symbol | |
|---|
| ID | 4255214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 2150648 |
|---|
| End bp | 2152366 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638122488 |
|---|
| Product | acetolactate synthase 3 catalytic subunit |
|---|
| Protein accession | YP_737879 |
|---|
| Protein GI | 114047329 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAGT TATCCGGCGC CAGCATGATT GTGCGATCCC TTATCGATGA AGGTGTAAAG
CACATATTTG GTTACCCTGG CGGCTCAGTG TTAGATATCT ACGACGCCCT GCACCTTATC
CCCGGTATTG AACATATTCT GGTTCGTCAC GAACAAGCCG CCGTGCATAT GGCCGATGGT
TATGCCCGTG CCACGGGTAA AGTGGGCGTG GTACTCGTGA CCTCAGGCCC AGGTGCCACC
AATGCCATTA CCGGCATCGC CACCGCCTAT ATGGATTCAA TTCCATTAGT GGTGTTATCA
GGCCAAGTGC CGAGCAATTT AATCGGTAAC GATGCGTTCC AAGAATGCGA CATGATTGGG
ATTTCACGCC CAGTCGTCAA ACACAGCTTT TTAGTACAAG ATCCCACTCA AATTCCTGAG
ATCATTAAAA AAGCCTTTTA TATTGCCTCC ACGGGTCGCC CCGGCCCCGT GGTTGTCGAC
TTGCCAAAGG ATTGCCTCAA TCCTGCATTA CTGCACGACT ATATTTACCC CGAGAGCATT
AAAATGCGCT CCTATAATCC AACGACATCG GGCCATAAGG GTCAAATTCG CCGTGGATTA
CAGGCATTAC TCGCCGCGAA AAAACCTGTG CTTTATGTGG GTGGCGGCGC CATTATCTCA
AGCAGTGAAA AGCAAATCTT AGCCCTAGCG GAAAAATTAA ATATCCCCGT TGTCAGCACC
TTGATGGGCC TTGGCGCCTT CCCTGGCACC CATAAAAACA GCTTAGGAAT GCTGGGGATG
CACGGTCGCT ATGAAGCCAA CATGACGATG CATAACTGCG ATCTAATCTT CGGGATTGGC
GTGCGTTTCG ATGACAGAAC CACCAACAAC ATCGAAAAAT ACTGCCCTAA TGCCACCATC
TTACATATTG ATATCGACCC TTCATCGATT TCAAAAACCG TACGAGTGGA TATCCCCATC
GTTGGCTCTG CCGATATCGT ATTAGACAGC ATGCTAGCCC TGCTCGAGGA GTCGAAGGAG
AGCAACGATA GCGAGGCAAT TAATCAATGG TGGCAAGAAA TCACAGTGTG GCGTAACCGC
AACTGCTTGG CATACGATAA GGAAAGTCAT CGGATCAAAC CACAGCAAGT GATTGAAACC
CTTTACAAAC TCACTAAGGG TGAGGCCTAT GTCGCCTCGG ATGTGGGCCA GCATCAAATG
TTTGCCGCGC TCTATTATCC CTTTGATAAA CCTCGTCATT GGATTAACTC CGGCGGCCTT
GGCACTATGG GCTTTGGCTT ACCCGCTGCC ATGGGAGTCA AAATGGCGAT GCCGGACGAA
ACCGTTGTGT GCGTCACGGG CGATGGTTCG ATTCAGATGA ATATCCAAGA GCTTTCAACC
GCTCTGCAAT ACGATACGCC GGTTAAAATT ATCAACTTAA ACAACCGTTT CCTTGGCATG
GTGAAACAAT GGCAGGATAT GATCTACTCG GGTCGCCATT CCCATTCCTA TATGGATTCG
GTCCCCAACT TTGCCAAAAT TGCCGAAGCC TATGGCCATG TTGGCATGAC GATTAGCGAT
CCTGCTGAGC TTGAGTCTAA GATGGCCGAA GCCCTTGCCA TGAAAGACAG ACTGGTATTT
ATCGACATTA TGGTGGATGA GACTGAGCAC GTGTATCCCA TGCTTATCCG CGGCGGCGCG
ATGAATGAAA TGTGGTTAAG CAAAACGGAG AAATGCTAA
|
|---|
| Protein sequence | MEKLSGASMI VRSLIDEGVK HIFGYPGGSV LDIYDALHLI PGIEHILVRH EQAAVHMADG
YARATGKVGV VLVTSGPGAT NAITGIATAY MDSIPLVVLS GQVPSNLIGN DAFQECDMIG
ISRPVVKHSF LVQDPTQIPE IIKKAFYIAS TGRPGPVVVD LPKDCLNPAL LHDYIYPESI
KMRSYNPTTS GHKGQIRRGL QALLAAKKPV LYVGGGAIIS SSEKQILALA EKLNIPVVST
LMGLGAFPGT HKNSLGMLGM HGRYEANMTM HNCDLIFGIG VRFDDRTTNN IEKYCPNATI
LHIDIDPSSI SKTVRVDIPI VGSADIVLDS MLALLEESKE SNDSEAINQW WQEITVWRNR
NCLAYDKESH RIKPQQVIET LYKLTKGEAY VASDVGQHQM FAALYYPFDK PRHWINSGGL
GTMGFGLPAA MGVKMAMPDE TVVCVTGDGS IQMNIQELST ALQYDTPVKI INLNNRFLGM
VKQWQDMIYS GRHSHSYMDS VPNFAKIAEA YGHVGMTISD PAELESKMAE ALAMKDRLVF
IDIMVDETEH VYPMLIRGGA MNEMWLSKTE KC
|
|---|
| |