| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1804 |
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| Symbol | |
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| ID | 4258389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2125652 |
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| End bp | 2127028 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638122462 |
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| Product | L-serine ammonia-lyase |
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| Protein accession | YP_737853 |
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| Protein GI | 114047303 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.731285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAGCG TATTCGATAT GTTCAAGATC GGCATTGGCC CTTCGAGTTC ACACACTGTT
GGCCCCATGA AAGCGGGCAA AATTTTTATG CAGCACCTTG CTGACTCGGG CAAAATTGCC
CAAGTAGATG AATTACGAGC CGAACTGTTT GGTTCCCTCG GCCAAACGGG TAAAGGTCAC
GGCACGGGTA AAGCGGTAAT TTTAGGCTTA ATGGGTGAAG ATCCAGAAAC CGTCGACACC
GACAGCATCG ATGGCATTCT TGAGCAAGTT TCTAAAAACG AGACCCTCAC CCTCAGCTGC
GGCAAAGTAG TCAAGTTTAC CCGTGAAGAC GGCATTACCT ACCACAGACG CAAAACGCTA
CCCGCCCATG CCAACGCCAT GACACTGTAT GCCTACAGCA AAGGCGAATG TATTTTTGAG
CGCACTTACT ATTCAGTCGG CGGCGGATTT ATCTTAGACG AAGATGAAAT CAATCAGCGC
AATGCCTCAC CAGCATCACA AATTGAATCA GCACCTTACG ATTTTAATAG CAGTGCTCAA
TTACTGGATT TATGTACTGA GCATGGCTTA AGCATTTCTT CCCTGATGAT GGCCAACGAG
CTTAGCCTCG CCAGCGAAGA AGAAGTCAAA GCTAAACTGT GGAATATCTG GCAAACCATG
AAAACCTGTA TCGAACGGGG TTATCAGAAG GAAGGTATTC TGCCTGGCGG TTTAAAGCTG
CGCCGCCGCG CACCTGCACT CTATCGTCGT CTCAAAGCCG AAGGCCGTAA CAACGTCGAT
CCATTAACCG CAATGGATTG GGTCGATTTA TTCGCCCTGT CGGTGAACGA GCAAAACGCT
GCCGGCGATC GCGTTGTCAC CGCACCAACA AACGGCGCCG CGGGCATTAT CCCTGCCGTG
CTGTGCTACT ACGATACCTT CGTGCAAGAA GTCGATATCG ATGTTTGCGC CCGTTACCTG
TTAACCGCTG CTGCGATTGG TATTTTGTAC AAGAAAAATG CCTCGATTTC GGGCGCTGAA
GTTGGCTGTC AGGGCGAAGT TGGTGTAGCC TGCTCAATGG CAGCTGGCGC ATTGACCGAG
ATCATGGGCG GCACAGTCGA ACATGTTGAA AACGCGGCCG AAATTGGCAT GGAACATAAT
CTAGGCCTGA CCTGCGACCC CGTAGGCGGC CTAGTACAAG TTCCTTGTAT TGAACGCAAT
GCGATGGGTG CAATCAAGGC CATTAACGCA TCACGCATGG CGCTGCGCGG CGACGGCAAC
CACAAGGTAT CACTGGATAA AGTGATTAAA ACCATGATGG ATACAGGTAA AGATATGCGC
AGTAAATACA AAGAAACCGC CAAAGGCGGC CTCGCTGTGA ACATTGTAGA GTGTTAA
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| Protein sequence | MISVFDMFKI GIGPSSSHTV GPMKAGKIFM QHLADSGKIA QVDELRAELF GSLGQTGKGH
GTGKAVILGL MGEDPETVDT DSIDGILEQV SKNETLTLSC GKVVKFTRED GITYHRRKTL
PAHANAMTLY AYSKGECIFE RTYYSVGGGF ILDEDEINQR NASPASQIES APYDFNSSAQ
LLDLCTEHGL SISSLMMANE LSLASEEEVK AKLWNIWQTM KTCIERGYQK EGILPGGLKL
RRRAPALYRR LKAEGRNNVD PLTAMDWVDL FALSVNEQNA AGDRVVTAPT NGAAGIIPAV
LCYYDTFVQE VDIDVCARYL LTAAAIGILY KKNASISGAE VGCQGEVGVA CSMAAGALTE
IMGGTVEHVE NAAEIGMEHN LGLTCDPVGG LVQVPCIERN AMGAIKAINA SRMALRGDGN
HKVSLDKVIK TMMDTGKDMR SKYKETAKGG LAVNIVEC
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