Gene Shewmr7_1777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1777 
Symbol 
ID4258801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2095728 
End bp2095949 
Gene Length222 bp 
Protein Length73 aa 
Translation table11 
GC content41% 
IMG OID638122436 
Productphage transcriptional regulator, AlpA 
Protein accessionYP_737827 
Protein GI114047277 
COG category[K] Transcription 
COG ID[COG3311] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.235945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTAA ACATAAAGCT AATTCGAATA AAAGACGTGA TTGACACCAC AGGTTTAGCC 
CGTTCAACCA TTTACAAGTA TGTCGATAAA GGTATTTTCC CCAAAGCAGT GAAACTGGGC
AGTAGATCAG TTGCATGGGT AGAAAGTGAA GTACAAGAGT GGATATTAGA AAGGATAGCA
CAGAGGGATG GAGCGGCCTC AAATCGTTCC TCTTCTTGTT AA
 
Protein sequence
MTLNIKLIRI KDVIDTTGLA RSTIYKYVDK GIFPKAVKLG SRSVAWVESE VQEWILERIA 
QRDGAASNRS SSC