Gene Shewmr7_1763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1763 
Symbol 
ID4258787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2083605 
End bp2084645 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content44% 
IMG OID638122422 
Productintegrase catalytic subunit 
Protein accessionYP_737813 
Protein GI114047263 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.274146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCATA CTAACAATCC CATCATTAAA CACAAAGCTG GTTTACTCAA TCTCGCTGAA 
GAATTGGGAA ACGTGTCTAG AGCTTGTAAA GTCATGGGGC TTTCCCGTGA TACTTTCTAT
CGCTATCAAG AGCTGGTTGA AAACGGCGGT GTTGAGTCGT TGATTAATCA GTCCAGAAGA
ACACCTAACC TCAAGAATCG TGTTGATGAT GTAACTGAAA ATGCCGTCTT AACACATGCT
ATCGCATTTC CTGCCCATGG GCAGTCTCGC TCTAGTAACG AGCTTCGAAA ACAAGGGATA
TTTGTCTCCG CCAGTGGCGT GCGCTCCATT TGGTTACGGC ATGGCTTAGA GAACTTCAAA
AAGCGATTAA AAGCCCTCGA AGCCAAAGTC GAGCTAGAAG GGATAATCCT TTCGGATGAA
CAAGTTGCCG CCCTTGAGCG TAAGCAGCAA GACGATGAAG CATGTGGTGA AATTGAAACG
CATCATCCAG GTTATCTCGG CTCACAAGAT ACCTTTTACG TTGGTAGTCT TAAGGGCGTA
GGCAGGATTT ATCAGCAAAC CTTTGTCGAT ACTTACAGCA AAGTTGCTTT CGCGAAACTG
TATACCACGA AAACCCCAAT CACCTCGGCC GATTTACTCA ACGACAGAGT ATTACCGTTC
TTTGAAACAC AGGCGCTGCC CATGTTGCGC ATTTTAACTG ACAGAGGAAC CGAATACTGT
GGCAAAGTGG AACAGCACGA CTATCAGCTG TATTTAGCAA TTAACGATAT AGAACACACT
AAGACGAAGG CGCGACACCC GCAAACGAAT GGGATCTGCG AACGGTTCCA TAAAACTATT
TTGAATGAGT TTTATCAGGT TACTTTCCGA AAAAAACTGT ACGCTAACAT GGAGGAACTA
CAAAAAGATC TGGACGAATG GCTGGCTTAT TACAACAATG AACGAACCCA TCAAGGTAAA
ATGTGCTGCG GCAGAACACC ACTGGCCACA TTAATAGATG GGAAACGGTT TTGGGCTGAA
AAGAATTTAG CTCAAATCTA A
 
Protein sequence
MLHTNNPIIK HKAGLLNLAE ELGNVSRACK VMGLSRDTFY RYQELVENGG VESLINQSRR 
TPNLKNRVDD VTENAVLTHA IAFPAHGQSR SSNELRKQGI FVSASGVRSI WLRHGLENFK
KRLKALEAKV ELEGIILSDE QVAALERKQQ DDEACGEIET HHPGYLGSQD TFYVGSLKGV
GRIYQQTFVD TYSKVAFAKL YTTKTPITSA DLLNDRVLPF FETQALPMLR ILTDRGTEYC
GKVEQHDYQL YLAINDIEHT KTKARHPQTN GICERFHKTI LNEFYQVTFR KKLYANMEEL
QKDLDEWLAY YNNERTHQGK MCCGRTPLAT LIDGKRFWAE KNLAQI