Gene Shewmr7_1761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1761 
Symbol 
ID4256288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2081154 
End bp2082389 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content46% 
IMG OID638122420 
Productphage integrase family protein 
Protein accessionYP_737811 
Protein GI114047261 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0148676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.285781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGGA GTACAAATAA GCTGACTGCA AAAGCGGTGC TCAATGCTAA AGCGGAAGCA 
AAGCCCTATA GATTGTCAGA TGGTGGCAAT CTCTATCTCT ATGTGCGCAC TGCAGGGAAA
ACGTGGGAAT TTAGATACAT ACGTCCCTCC ACCAGCAAAC CCACCTATTT TGGTTTAGGC
TCATATCCTG ACGTATCCTT AGCTGAGGCG CGAGATAAAG CGCTAGAAGC GCGAAAAAAC
TTGGCCGAAG GCATCGACCC TCAATTACTT AAAGTTGAAA ACAAATTAAA AGCGGCAACA
GAGAACGCTC AAACTCTCAA GCATATTGCG CAAATGTGGA TGGACTCTAA GCAGGGAAGC
ATTAAGCCTA AAACCATCGA AGGCAATTGG CGTAAGCTTG AGCTGTATGC CTTCCCTAAA
CTGGGGAGTA TTGCGATTAG CAGACTCACG GCTCCCATAG CCATTGCCGC GCTAAAGCCC
CTAGAGCAAA AGGGGCATCT TGAAACGGTT AAGCGTACCG CTCAGTTGCT GAATGAAATC
ATGAACTATT CGGTTAACTC TGGTTACATT CATGCCAATC CGTTGTCAGG TATTCGAGAA
GTTTTTAGAA AAAGCAAAGT GGAGCATCTG AAGGCATTAA AACCAGCAGA GCTAGCTGAA
TTACTGCAGA CCGTCGCAAA CGCCAATTTA TTGCTAACGA CCAGGTGTTT GATTGAATGG
CAATTGCACA CAATGACCAG GCCAAATGAA GCGGCCGGAG CCCGTTGGGA AGAAATCGAT
TTTGATGCCA AACTTTGGAC TATTCCTGAA TCGCGCATGA AAATGAATCG TGAGCATATT
ATCCCGCTTA CAGAGCATAC CCTCGCGATA CTGGAAACTG TTAAGCCGAT TGGTGAACAC
AGCCAATTCG TTTTTCCGTC TTCTAAAGAT CCCAAAAAGC ACACAGATCC AGAAACCATC
AACAAAGCAT TAGGGCGCAT GGGATTAAAG GGAAGAACAA CGGGTCATGG TTTACGCTCG
CTGGCGAGCA CTACCTTAAA CGAACAAGGC TTTGATGGTG ATGTTATTGA GGCTGCGTTA
GCCCATGTTG ATAAAAACCA AATCCGCAGT GCCTATGATC GCACTACCTA TTTAGAGCGA
CGGACCAAGT TAATGGAGTG GTGGAGCAAT CATATTGCCA CTGCAGCAGT TGGCTCTTTG
TCAGTAACAG CGGGTTCAAG AAAATTAGGG GCATGA
 
Protein sequence
MGRSTNKLTA KAVLNAKAEA KPYRLSDGGN LYLYVRTAGK TWEFRYIRPS TSKPTYFGLG 
SYPDVSLAEA RDKALEARKN LAEGIDPQLL KVENKLKAAT ENAQTLKHIA QMWMDSKQGS
IKPKTIEGNW RKLELYAFPK LGSIAISRLT APIAIAALKP LEQKGHLETV KRTAQLLNEI
MNYSVNSGYI HANPLSGIRE VFRKSKVEHL KALKPAELAE LLQTVANANL LLTTRCLIEW
QLHTMTRPNE AAGARWEEID FDAKLWTIPE SRMKMNREHI IPLTEHTLAI LETVKPIGEH
SQFVFPSSKD PKKHTDPETI NKALGRMGLK GRTTGHGLRS LASTTLNEQG FDGDVIEAAL
AHVDKNQIRS AYDRTTYLER RTKLMEWWSN HIATAAVGSL SVTAGSRKLG A