| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1753 |
|---|
| Symbol | |
|---|
| ID | 4256280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 2063916 |
|---|
| End bp | 2064926 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638122411 |
|---|
| Product | BNR repeat-containing protein |
|---|
| Protein accession | YP_737803 |
|---|
| Protein GI | 114047253 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0888292 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.639516 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTTC GCATCCTTCA ATGCGCCGCT GCAATCAGTG TGAGTTGTTT ATTTTCTTTC
CCTTCATTTT CTGCGGTGTC TGAGACTTTC CCGCAAATTC AGCCCTTAGC GGCATCTTCT
TTAGTGTTAG ATATTGCCCA TGCGGGGCAG CGTTTAGTCG CCGTGGGTGA GCGTGGCCAT
GTGCTCGTAT TGAATGACAT CTGGCAACAA GTGCCGACAC CGACCTCGGC GCAGCTGACA
AAAGTGTTCT TTTTAAATGA AAAACTCGGT TGGGCAGTGG GGCACGATGC CACTATTTTA
CATACCCAAG ATGGCGGCCA GACTTGGTCA TTACAAATGC AGTCGAGAGA CATTGAAAAA
CCCTTCCTCG ATGTGCTGTT TCTCAATGAG CAGGACGGCA TGGCCATTGG GGCTTATGGA
CTGTTTTATC GAACCCATGA TGGCGGCAAG ACCTGGGTAG AAGAATTCCA CGAAGAGTTG
CTGGCCGAAG AAGACGTATC CTATCTGGCT GAATTAAAAA GCAGCGATCA AGCCGCTTAT
CTAACTGAGC GCGCCTCGTT ACTGCCGCAT TTTAATCGGA TGATCGTGCT CAATGATGGT
CGTTTGTTAT TAGTCGGAGA GCTTGGGCTT GTGGCGGTGT CGGCCGATAA GGGCCAAACC
TTTACCCGTA CGGGGTTTGA TTACGACGGC TCTATGTTCA ATGCCATTCA ATTGCAGGAT
GCTGTCTATG TCATGGGACT GAGGGGACAC GTCTTTAAGG CGGATTTGAG CCTTGGCCAA
TGGGATGAGA TAGATTTGCC CGTGCAGTCA TCCATCAATG GCGCCTTGGT GAGCTCAGAT
ACAAGCTTGT ACCTTGTGGG GAATGCCGGC GTCGTTATAC AGCTTAATCA GGATGATAGT
GCGAGTATTG TCACTCGTCG CCAGGGGGAA AACTTAGTTT CGATTGCCAA AGATAACCAA
GGGAATGTGT GGTTATCGGG TAGCCAAGGG CTACTCACAC TGAAGCCATA A
|
|---|
| Protein sequence | MSFRILQCAA AISVSCLFSF PSFSAVSETF PQIQPLAASS LVLDIAHAGQ RLVAVGERGH
VLVLNDIWQQ VPTPTSAQLT KVFFLNEKLG WAVGHDATIL HTQDGGQTWS LQMQSRDIEK
PFLDVLFLNE QDGMAIGAYG LFYRTHDGGK TWVEEFHEEL LAEEDVSYLA ELKSSDQAAY
LTERASLLPH FNRMIVLNDG RLLLVGELGL VAVSADKGQT FTRTGFDYDG SMFNAIQLQD
AVYVMGLRGH VFKADLSLGQ WDEIDLPVQS SINGALVSSD TSLYLVGNAG VVIQLNQDDS
ASIVTRRQGE NLVSIAKDNQ GNVWLSGSQG LLTLKP
|
|---|
| |