| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1748 |
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| Symbol | |
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| ID | 4256275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2054894 |
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| End bp | 2056945 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638122406 |
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| Product | carboxy-terminal protease |
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| Protein accession | YP_737798 |
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| Protein GI | 114047248 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0158568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAAC TCACTTTGGC TACATCCATT GCCACTGTTT TTGTCGGATT CTCGGCTTGG
GCTGTCCCCC CTACGATTCA AATCAGCGAG TTACCCACTC TCAAGCAGGA AGCGCAGCAT
AAAGTGGCGA GTAAGCGAGT GACGGATTTA TACACTCGTT CCCACTATCA TAGATTTGCA
TTAGATGATG CGTTTTCTGC TCAGATTTTT GACCGCTACC TGCAGCAACT CGATTACCGT
CGTAATGTGC TGACGCAAGC CGATGTCGAT AGCTTCAAAC CTTACATTAA TCAGTTTGAC
GATATGCTGA GCTCGGGTGA ACTCGAGCCT GCTTATAAGA TGTTTGATTT GGTTCAGAAA
CGTCGCTACG AAGGTTTTGT ATACGCACTT TCTCTGCTCG ACAAAGAGAT GGACTTTACC
GTTCCGGGTG ATGCCTACGA ATACGATAGA GAAGATGTTG CTTGGCCAAA AGATCAAGCC
GAAATCAACG AATTATGGCG TCAACGTGTT AAATACGATG CGCTGAACCT GAAACTCACT
GGCAAGAAAT GGCCTGAAAT CGTTGATATT CTGCAAAAGC GCTATAACAA CGCCATCAAG
CGTCTGACTC AGACCAATAG CGAAGATGTG TTTCAAGCGG TGATGAATGC GTTCTCCCGT
AGCATCGAGC CACATACTAG CTATTTATCG CCCCGTAATG CTGAACGTTT CCAAATGGAA
ATGAACTTAA GCCTCGAGGG GATTGGTGCG CAGTTACAGC TTGAAGACGA TTACACTGTC
ATCAAGAGCT TGATTGCAGG CGGTCCTGCG GCCAGCAGTG AAAAACTGTC GCCTGAAGAT
AAGATCGTCG GTGTCGGCCA AGAAGGCGGT GAGATTGTTG ATGTGATCGG CTGGCGATTA
GACGATGTGG TCGATCTGAT CAAAGGGCCT AAGGGCAGTA AAGTCGTATT ACAGATTTTA
CCTAAGAAGG GCGGCTCTAA CGCTAAGCCG TTTAATCTGA CCTTAGTGCG CGACAAAATT
CGTTTAGAAG ACCGTGCCGC GACCTCAAAG ATCATCGAGC CGAAAGACGG TGAATACGCC
AACCGTAAAG TGGGTGTGAT TCAAATTCCT GGTTTTTACA TGAACTTATC CCAGGATGTC
GAAAAGGAAT TGGTGAAGTT AAACGAAGCC AAGGTTGAAG GCGTCGTCAT CGACTTACGT
GGTAATGGCG GCGGTGCGTT GACCGAAGCC GTGTTACTGA CGGGACTCTT TATCGATATG
GGCCCTGTGG TGCAAGTACG TGACGCCGAT GGTCGAGTGT CTGCCCACCG TGATAACGAT
GGCAAGACGA CCTACGCTGG TCCGTTAACC ATTATGGTTG ACCGTTACAG TGCATCAGCT
TCGGAAATTT TTGCCGCTGC GTTGCAAGAT TACGACCGTG CGCTGATTGT TGGTGAGTCA
AGCTTTGGTA AAGGCACTGT GCAGCAGCAT AAGAGCCTTG GTCGAATCTA CGATATGTAC
GAGAAGCCGA TTGGCCACGT GCAGTACACG ATTCAAAAGT TCTACCGTAT CAACGGTGGC
AGCACTCAGC TCAAAGGCGT AACCCCTAAC ATTGCTTACC CAAGTGCGTT AGAGCCGGGT
GAATACGGTG AAGCGGAAGA GAAGAATGCT TTACCTTGGG ACAAAGTGCC AATGGCGCAA
TACGGCACCC TAAACGACAT CACCCCTGAG TTGGTGGCGA GTTTAGATAA AAAGCACCTT
GCCCGTATTC AGAACAATGT TGAGTTTAAC TATATCAATC AAGATATTGC CGACTTTAAA
AAGCATCATA AAGAGAAAAC TGTCTCCTTA GTTGAAAGTG AGCGCATTGC CTCGCGTGAA
GCCGATGAGA AGAAAGTTCT CGATAGAACC AACGAGCGTC GTGTTGCCCA TGGTTTAGCC
GCGGTTAAAT CGATGGAAGA CATTAAAGAC AAAGACGACG TTGAAGCACC AGATGCCTTC
TTAGACGAAA CGGCTTATAT CACCTTAGAT ATGGCGGATG CAAAAAAGCT GGCTAACGCT
GGCACTAAAT AG
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| Protein sequence | MRKLTLATSI ATVFVGFSAW AVPPTIQISE LPTLKQEAQH KVASKRVTDL YTRSHYHRFA
LDDAFSAQIF DRYLQQLDYR RNVLTQADVD SFKPYINQFD DMLSSGELEP AYKMFDLVQK
RRYEGFVYAL SLLDKEMDFT VPGDAYEYDR EDVAWPKDQA EINELWRQRV KYDALNLKLT
GKKWPEIVDI LQKRYNNAIK RLTQTNSEDV FQAVMNAFSR SIEPHTSYLS PRNAERFQME
MNLSLEGIGA QLQLEDDYTV IKSLIAGGPA ASSEKLSPED KIVGVGQEGG EIVDVIGWRL
DDVVDLIKGP KGSKVVLQIL PKKGGSNAKP FNLTLVRDKI RLEDRAATSK IIEPKDGEYA
NRKVGVIQIP GFYMNLSQDV EKELVKLNEA KVEGVVIDLR GNGGGALTEA VLLTGLFIDM
GPVVQVRDAD GRVSAHRDND GKTTYAGPLT IMVDRYSASA SEIFAAALQD YDRALIVGES
SFGKGTVQQH KSLGRIYDMY EKPIGHVQYT IQKFYRINGG STQLKGVTPN IAYPSALEPG
EYGEAEEKNA LPWDKVPMAQ YGTLNDITPE LVASLDKKHL ARIQNNVEFN YINQDIADFK
KHHKEKTVSL VESERIASRE ADEKKVLDRT NERRVAHGLA AVKSMEDIKD KDDVEAPDAF
LDETAYITLD MADAKKLANA GTK
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