| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1680 |
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| Symbol | |
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| ID | 4256314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1981236 |
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| End bp | 1982033 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638122339 |
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| Product | ribosomal large subunit pseudouridine synthase E |
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| Protein accession | YP_737731 |
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| Protein GI | 114047181 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAA ACAGTACGCC AGCAACAACA TCAAACACCC GCGCCCGCAG CCAACGCACT
TCATTTAAGC GCGACAATCA AGCTGATAGC CGCGCAAGTA ACAAGAAGAC CAATAACTTT
GCCAGAGCTG CCACGCCAGG TTTACAGCGG GGAGGTACTT CTGAGCGAAA CAGTTCTGAA
CGCGGAGGAG CTAAATCACG CCCGCAAAGG CATTCCTCAA CAACGCGTAC AAAACCCCAA
GGCGATCCGA TGATCGTCTT ATTTAATAAG CCGTTCGATG TCCTATGCCA ATTTACCGAT
GAGCAAGGCC GTAAAACCTT AAAGGATTAC ATCCCTATTC CGGGTGTGTA CGCCGCAGGG
CGATTGGATC GCGACAGTGA AGGCTTGTTA CTCCTCACCA ACGATGGTCA ACTTCAGGCC
AAACTGACTG AGCCGAAAAA GAAAACCTTT AAAACCTATT GGGTGCAAGT CGAGGGAGAA
CCTACGGAAG CAGATTTAGC GAAACTGCGC CAAGGTGTTG AATTAAAAGA TGGCATGACA
CTCCCTGCGA AGGTCAGCCT CATGGCGACG CCGAATGTTT GGCCGCGTAA TCCGCCGATC
CGTGAGCGAA AAAACATCCC TACCACTTGG CTAGAAATTC AAATCCATGA AGGACGCAAT
CGCCAAGTTC GGCGTATGAC GGCCCATATT GGTTTTCCAA CCTTAAGACT CATTCGTTAT
AAAATAGGTC AATGGAGTCT AGATGATTTA GCCACCGGCG AGCATAAATG CATCCAAGTG
ACTCAAAAGA TGGAATGA
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| Protein sequence | MNKNSTPATT SNTRARSQRT SFKRDNQADS RASNKKTNNF ARAATPGLQR GGTSERNSSE
RGGAKSRPQR HSSTTRTKPQ GDPMIVLFNK PFDVLCQFTD EQGRKTLKDY IPIPGVYAAG
RLDRDSEGLL LLTNDGQLQA KLTEPKKKTF KTYWVQVEGE PTEADLAKLR QGVELKDGMT
LPAKVSLMAT PNVWPRNPPI RERKNIPTTW LEIQIHEGRN RQVRRMTAHI GFPTLRLIRY
KIGQWSLDDL ATGEHKCIQV TQKME
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