Gene Shewmr7_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1650 
Symbol 
ID4257363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1940231 
End bp1941310 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content50% 
IMG OID638122310 
Producthypothetical protein 
Protein accessionYP_737702 
Protein GI114047152 
COG category[S] Function unknown 
COG ID[COG3249] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00643743 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000363492 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGAAAT TCCTATTAAA GCCAAGCTTA CTCGCGTTTT TATACTGCCT GTTTACCGTT 
AATAGCCTGC AAGCTGTTGA AGTGAGTAAA TTAGATGAAG CCGATGTGCC CGTGACCTCC
CGCTCTGTGC CTGAGCGGAA TAAAGCCCTA AAAGCCGCGC TGGAAAAAGT GATCATTAAG
AATACAGGGA CAGCACGTTC TTTGGATAAC GGCGTTATCC AATTGCAACT GGCCAATCCC
GATGCACTGC TGAGCCAATA TGGTTATGTG GAGCAAAATG GCCAACTGCT GTTAAAAGCC
AACTTTGAGC ATCGCCGCAT TATTACCCTG TTACGTCAGG CCCAATTACC CGTGTGGGGC
ATTCAGCGTC CACTGACACT CTTTTGGGTT GCCATGCCAA GTGAAGGTGA CACGATTTTA
CTGGGTGATT CATCGACCTT AGACGAGCGT CAGGCATTCA ATACCTTCTC CGATGAGCGC
GGCATTCCCG TCTTGCTGCC AATCCTCGAC CTCGATGAGT TAATGGGCAT CAATCCCAAT
GATGTCAAAG GCATGTTTGC CGATATAGTG TCTAGCGTCT CTGGACGTTA CCAAGCCGAC
TTCTTAGCCC TCGTCGCTAT TGAACCTGCG GGAAACCAAG TGCGTTACCG CTTGAATTTG
TACACCAAGG CCACGATCGA CTCGTTAACG CCACTGTTTA GTTTTAATGG CACGGCAGAA
AATAGCGCGC AGGCGATCAC CGCCATGATG GCCGCCCTCG GGGATTATTA TTTTACTAAG
TACGCCATTG CCGATTCGGG CGAGCAGGTC GGTGCCAGTG TGACCTTCGT GAACATTGAT
AAAATGGCGC AGCTAGTTGA AGTGGAAAAA TACTTAAAGC AACTCAGCGC AGTGAAGAAT
GCGACGCTGT CGCGCATCCA AGGCAATACC GCAACCTTTT CCTTGGATTT GTTTGGTTCA
CAGACCGACT TTGAGCGTTT ACTGAGTCTA GAGCCGCGAA TTTCGGTGGT GGCGCCAGGG
GAGTTTTCTG CCGGTGCCAG CCCAGCGGGT AAAACTGTCT ATCAATGGCG GTTACCTTAA
 
Protein sequence
MLKFLLKPSL LAFLYCLFTV NSLQAVEVSK LDEADVPVTS RSVPERNKAL KAALEKVIIK 
NTGTARSLDN GVIQLQLANP DALLSQYGYV EQNGQLLLKA NFEHRRIITL LRQAQLPVWG
IQRPLTLFWV AMPSEGDTIL LGDSSTLDER QAFNTFSDER GIPVLLPILD LDELMGINPN
DVKGMFADIV SSVSGRYQAD FLALVAIEPA GNQVRYRLNL YTKATIDSLT PLFSFNGTAE
NSAQAITAMM AALGDYYFTK YAIADSGEQV GASVTFVNID KMAQLVEVEK YLKQLSAVKN
ATLSRIQGNT ATFSLDLFGS QTDFERLLSL EPRISVVAPG EFSAGASPAG KTVYQWRLP