Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1650 |
Symbol | |
ID | 4257363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1940231 |
End bp | 1941310 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638122310 |
Product | hypothetical protein |
Protein accession | YP_737702 |
Protein GI | 114047152 |
COG category | [S] Function unknown |
COG ID | [COG3249] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00643743 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000363492 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGAAAT TCCTATTAAA GCCAAGCTTA CTCGCGTTTT TATACTGCCT GTTTACCGTT AATAGCCTGC AAGCTGTTGA AGTGAGTAAA TTAGATGAAG CCGATGTGCC CGTGACCTCC CGCTCTGTGC CTGAGCGGAA TAAAGCCCTA AAAGCCGCGC TGGAAAAAGT GATCATTAAG AATACAGGGA CAGCACGTTC TTTGGATAAC GGCGTTATCC AATTGCAACT GGCCAATCCC GATGCACTGC TGAGCCAATA TGGTTATGTG GAGCAAAATG GCCAACTGCT GTTAAAAGCC AACTTTGAGC ATCGCCGCAT TATTACCCTG TTACGTCAGG CCCAATTACC CGTGTGGGGC ATTCAGCGTC CACTGACACT CTTTTGGGTT GCCATGCCAA GTGAAGGTGA CACGATTTTA CTGGGTGATT CATCGACCTT AGACGAGCGT CAGGCATTCA ATACCTTCTC CGATGAGCGC GGCATTCCCG TCTTGCTGCC AATCCTCGAC CTCGATGAGT TAATGGGCAT CAATCCCAAT GATGTCAAAG GCATGTTTGC CGATATAGTG TCTAGCGTCT CTGGACGTTA CCAAGCCGAC TTCTTAGCCC TCGTCGCTAT TGAACCTGCG GGAAACCAAG TGCGTTACCG CTTGAATTTG TACACCAAGG CCACGATCGA CTCGTTAACG CCACTGTTTA GTTTTAATGG CACGGCAGAA AATAGCGCGC AGGCGATCAC CGCCATGATG GCCGCCCTCG GGGATTATTA TTTTACTAAG TACGCCATTG CCGATTCGGG CGAGCAGGTC GGTGCCAGTG TGACCTTCGT GAACATTGAT AAAATGGCGC AGCTAGTTGA AGTGGAAAAA TACTTAAAGC AACTCAGCGC AGTGAAGAAT GCGACGCTGT CGCGCATCCA AGGCAATACC GCAACCTTTT CCTTGGATTT GTTTGGTTCA CAGACCGACT TTGAGCGTTT ACTGAGTCTA GAGCCGCGAA TTTCGGTGGT GGCGCCAGGG GAGTTTTCTG CCGGTGCCAG CCCAGCGGGT AAAACTGTCT ATCAATGGCG GTTACCTTAA
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Protein sequence | MLKFLLKPSL LAFLYCLFTV NSLQAVEVSK LDEADVPVTS RSVPERNKAL KAALEKVIIK NTGTARSLDN GVIQLQLANP DALLSQYGYV EQNGQLLLKA NFEHRRIITL LRQAQLPVWG IQRPLTLFWV AMPSEGDTIL LGDSSTLDER QAFNTFSDER GIPVLLPILD LDELMGINPN DVKGMFADIV SSVSGRYQAD FLALVAIEPA GNQVRYRLNL YTKATIDSLT PLFSFNGTAE NSAQAITAMM AALGDYYFTK YAIADSGEQV GASVTFVNID KMAQLVEVEK YLKQLSAVKN ATLSRIQGNT ATFSLDLFGS QTDFERLLSL EPRISVVAPG EFSAGASPAG KTVYQWRLP
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