Gene Shewmr7_1648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1648 
Symbol 
ID4257361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1938316 
End bp1938648 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content42% 
IMG OID638122308 
Productglutaredoxin-like protein 
Protein accessionYP_737700 
Protein GI114047150 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0278] Glutaredoxin-related protein 
TIGRFAM ID[TIGR00365] monothiol glutaredoxin, Grx4 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000432966 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000256673 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAACAG TAGAGAAAAT TAAACAGCAA ATCGCTGAAA ACCCCATCAT CGTCTACATG 
AAGGGTTCTC CTAAATTACC AAGCTGTGGT TTTTCATCTC AGGTAGCACA AATCATGATC
AACTGCGGCG AGCAGTTTGC ATTTGTGGAT ATTCTCCAGC ACCCAGATAT CCGTGCGGAA
TTACCTAAGT ATGCAAACTG GCCAACTTTC CCACAATTGT GGATTGAAGG CGAGCTGATT
GGTGGTTGTG ATATCGTTGT TGATATGTAC CAAAAAGGCG AATTACAGCC GTTAATCAAA
GCGACTGCTG ATAAATACAA AACTGCAGAG TAA
 
Protein sequence
METVEKIKQQ IAENPIIVYM KGSPKLPSCG FSSQVAQIMI NCGEQFAFVD ILQHPDIRAE 
LPKYANWPTF PQLWIEGELI GGCDIVVDMY QKGELQPLIK ATADKYKTAE