Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1609 |
Symbol | |
ID | 4258707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1890537 |
End bp | 1892459 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638122266 |
Product | ABC transporter ATPase component |
Protein accession | YP_737664 |
Protein GI | 114047114 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.111541 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTCTGG TTCGTATCAA TAATGGCTCG TTAGCCTATG GTTATACTCC GCTGCTGCAA AATGCCGATT TCACCATCGA GCGCGGCGAG CGAGTGTGTA TTGTTGGCCG CAACGGCGCG GGCAAGTCGA GTCTATTGAA GATTTTATCC GGCGATGTGC TGCTCGATGA GGGGGAATTC AACATCGATG GCAGCGTCAC CGTTAGCCGT TTGCAGCAAG ATCCGCCAAA GGCGGAGCAG GGTTCGGTCT ACTCTTATAT CGCTGCGGGC TTAAAGGAAG TTGGTGAAGC CTTAGAGCAG TACCATCAAC TGTCCCACGA TGTGGCCTTT GCCGAACCTG AGCAGATGGA GCGCATGCTC AATCAAATGC AAAAGCTGCA GGAGACCTTA GATCATCACA ACGGTTGGCA GCTTGACTCG CGTATCAAAC AAAATTGTGA ATTATTAGGC CTCGATCCCG ATAAATCTTT GAGTGAATTA TCCGGTGGTT GGCAGCGTAA AGTGGCGCTT GCCCGTGCGC TAGTCAGTGC ACCAGATTTG TTACTGCTCG ATGAGCCAAC TAACCATTTG GATATCGATA CTATCGAATG GCTGGAAAAA TTCTTGCTGG ATTTCCAAGG TGCCATTGTA TTTATCAGCC ACGACAGGGG CTTTATTGCC CGTATGGCAA CTCGCATCGT CGACTTAGAC CGCGGCGTAG TGACCTCATG GCCGGGGAAT TACCAAGCTT ATCTTGATGG TAAGCAGGAG TGGCTCCGAG TCGAAGCCGA GAAAAATGCA TTATTCGATA AACGTTTAGC AGAAGAAGAA GTTTGGATCC GCCAAGGCGT TAAGGCCCGT CGTACCCGCA ACGAAGGCCG CGTGCGTGCA TTGAAAGCAC TGCGCCAAGA ACGCAGCGAA CGCTTGAATC GTCAGGGCAA TGCTAAGATG GCGGTGGCCG ATACCGATCG TTCGGGTAAG TTAGTCTTCG ATGTGAAGGA CTTAAACTAC AATCTGCCCG ATAAAAATCT GGTTAAAAAC TTTAATACTA CGGTATTGCG TGGCGACCGT ATTGCACTTA TTGGCCCGAA CGGTTGTGGT AAATCGACGC TTATTAAGCT ATTGATTGAA AAGTTACAAC CCCAATCGGG TGAGGTAAAA GTCGGTACTA AGTTAGAGAT TGCCTATTTC GACCAATACC GTGAGGCGCT AGATCCTGAG CAAACCGTTG AAGATAACGT GGGTGAGGGT AAAAAGACCA TCACCATTAA TGGTCAAGAC CGACATATCT TAAGTTATCT GCAGGACTTC CTATTTTCGC CGATGCGCGC TCGTACTCCA GTGAAGGCAT TATCGGGTGG TGAGAAAAAC CGATTACTGC TGGCTAAGTT ACTTATTCGT CCCGCTAACC TGATTATCCT CGACGAACCG ACAAACGATC TTGATATTGA GACCCTAGAA TTGCTAGAGT CGCTGCTGAC TGAATATCAA GGCACACTGT TACTCGTGAG CCATGATAGG GCCTTTATCG ATAACACTGT CACCAGCAGC TGGTGGTATG CGGGTAATGG GCATTGGAGC GAGTATGTCG GTGGTTATCA AGACGCTATA GACCAAGGGG CAAAGTTTTA TTCTGAGGAA CCTAGTCAGC CAAACACGGT CGAAGCTCCT GCGACAGCTA AAACCGCTGA GGTTAAAGTG GCCGAGCCTG CCAAAGCCGC GAAAAAACTG TCCTATAAGT TACAGCGTGA ATTAGAGGCC ATGCCTGAGT TAATGGAGAA ATTAGAGGCT GAAATCCTCG AATTGCAAAC CACAGTGGCG CGCCCAGATT TTTATAGTCA AGCACAGGAT AAAATCAATC CAATATTGAA CCTGTTGGCA GATAAAGAAA AACAATTGGA AGTTTGCTTC GAGCGATGGG AAGAGCTTGA GTCACTGAAG TAA
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Protein sequence | MSLVRINNGS LAYGYTPLLQ NADFTIERGE RVCIVGRNGA GKSSLLKILS GDVLLDEGEF NIDGSVTVSR LQQDPPKAEQ GSVYSYIAAG LKEVGEALEQ YHQLSHDVAF AEPEQMERML NQMQKLQETL DHHNGWQLDS RIKQNCELLG LDPDKSLSEL SGGWQRKVAL ARALVSAPDL LLLDEPTNHL DIDTIEWLEK FLLDFQGAIV FISHDRGFIA RMATRIVDLD RGVVTSWPGN YQAYLDGKQE WLRVEAEKNA LFDKRLAEEE VWIRQGVKAR RTRNEGRVRA LKALRQERSE RLNRQGNAKM AVADTDRSGK LVFDVKDLNY NLPDKNLVKN FNTTVLRGDR IALIGPNGCG KSTLIKLLIE KLQPQSGEVK VGTKLEIAYF DQYREALDPE QTVEDNVGEG KKTITINGQD RHILSYLQDF LFSPMRARTP VKALSGGEKN RLLLAKLLIR PANLIILDEP TNDLDIETLE LLESLLTEYQ GTLLLVSHDR AFIDNTVTSS WWYAGNGHWS EYVGGYQDAI DQGAKFYSEE PSQPNTVEAP ATAKTAEVKV AEPAKAAKKL SYKLQRELEA MPELMEKLEA EILELQTTVA RPDFYSQAQD KINPILNLLA DKEKQLEVCF ERWEELESLK
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