Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1568 |
Symbol | |
ID | 4254914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1833663 |
End bp | 1835009 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638122216 |
Product | RDD domain-containing protein |
Protein accession | YP_737623 |
Protein GI | 114047073 |
COG category | [S] Function unknown |
COG ID | [COG1714] Predicted membrane protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.957894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.02442 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAAC AACAAACGGA CTTGGGCAAA GATCCAAGAA CTATGGTCAC CCCTAAGGCA TTCACTATTG CCGAATCTGT GCTTTACACT CCGCTAGCGA CGCCATTAAG GCGGGCGCTG GCGATGTTAA TTGACGGTTT CTTCATCACT ATTTTAGCCG AACAAATGGA TTGGCTGTTT GTTCTGCTGG TGGTGGGGAT TATTTATATC GAGAAACGCA GTCGCCAATT TGGCCGCGTA CTCAAATGGG GCCTCTATGC CGCCATGCTG GGGTTAATGC TCTTTAGCTC GGCGGGAAAT TTGTGGAATT TCCATCAATC GAATCAATCC ACCCGCGAAA AGGTCTCCGC GCCCCAGGAT ATTAACGCTG TTGTTAAGGC GATTCCTGGC CTTGTCTCCC TCGGACTCTG TGAAAATACC GATTGCGCCC GTGAACAGAT CCGTGCCCTG CAGCAGACGC TCGAAAATGT GCCCATGGAG GGAATGTCGG CAGCTGAGCG GCGCGATATG GTATTAGATA CTTTAGCAAG CACGGAGTTA TCCGAGGCCG ATAAAGCACT CTTACGTGAT GAAATTATGG CGGGCAGCCT CTGGCCCGAG GTGAAGGTGT TTGAAGTCAC CCTAGACTCC ACCAAGGGCT TAGCTAAAAA TTCAACCAAG GATTTAGCTA AGGATCTAAG CACATTATCA CCGCCGCCAC AGCCAAGTCC GTCGCTCGCA AATCTGTCGT CCGCTGGCAA GCTTGATGCC GTTCCCGTAT CTGAACCGCA AACCGATGGA TTAGCCAACG CTCAAACCGA TAATCAAGTG ACAATGGAAA ACGCTCCCTC AGTTCCCGAC ACCAACCTCA ATCCTTTGCA TCAAACCGAA AACCGCAACA GTGAAGCCGA TGATGAGAAA GAGAGTGACA CCCGCAGTGT GCTGGCGTGG ATCAAAGGCT TTATGAGCGA TATGGGTTTA GGTTTTGGCT GGGCCGCATT TTACTTCACT GTGTTTACCG CCAAATTTGA TGGTCAGACC TTAGGTAAGA AACTCTTAGG CATCCGCGTT ATCCAACTCG ATGGCGCTAA AATCAGCCTT TGGGGGGCAT TTGGCCGTTA TGGTGGTTAT GCGGCGGGCT TCACGACGGG CTTACTGGGC TTTATGCAGA TATTTTGGGA TGCCAATCGG CAGGGGATCC AAGATAAAAT ATCTTCCACA GTCGTGATAG ACTTAGCGCA AATGCATAAA AAGCAACAAT TAGAGCAGCA ACAGGCGCAG GCTGAACATG CATTGGCCTA CGTGCCAACA CAGAATAATG CGACGTCTGC TCACCTTACA ACAAGCACCC GTTCGGAGCA CCTATGA
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Protein sequence | MKQQQTDLGK DPRTMVTPKA FTIAESVLYT PLATPLRRAL AMLIDGFFIT ILAEQMDWLF VLLVVGIIYI EKRSRQFGRV LKWGLYAAML GLMLFSSAGN LWNFHQSNQS TREKVSAPQD INAVVKAIPG LVSLGLCENT DCAREQIRAL QQTLENVPME GMSAAERRDM VLDTLASTEL SEADKALLRD EIMAGSLWPE VKVFEVTLDS TKGLAKNSTK DLAKDLSTLS PPPQPSPSLA NLSSAGKLDA VPVSEPQTDG LANAQTDNQV TMENAPSVPD TNLNPLHQTE NRNSEADDEK ESDTRSVLAW IKGFMSDMGL GFGWAAFYFT VFTAKFDGQT LGKKLLGIRV IQLDGAKISL WGAFGRYGGY AAGFTTGLLG FMQIFWDANR QGIQDKISST VVIDLAQMHK KQQLEQQQAQ AEHALAYVPT QNNATSAHLT TSTRSEHL
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