Gene Shewmr7_1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1568 
Symbol 
ID4254914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1833663 
End bp1835009 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content50% 
IMG OID638122216 
ProductRDD domain-containing protein 
Protein accessionYP_737623 
Protein GI114047073 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.957894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.02442 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAC AACAAACGGA CTTGGGCAAA GATCCAAGAA CTATGGTCAC CCCTAAGGCA 
TTCACTATTG CCGAATCTGT GCTTTACACT CCGCTAGCGA CGCCATTAAG GCGGGCGCTG
GCGATGTTAA TTGACGGTTT CTTCATCACT ATTTTAGCCG AACAAATGGA TTGGCTGTTT
GTTCTGCTGG TGGTGGGGAT TATTTATATC GAGAAACGCA GTCGCCAATT TGGCCGCGTA
CTCAAATGGG GCCTCTATGC CGCCATGCTG GGGTTAATGC TCTTTAGCTC GGCGGGAAAT
TTGTGGAATT TCCATCAATC GAATCAATCC ACCCGCGAAA AGGTCTCCGC GCCCCAGGAT
ATTAACGCTG TTGTTAAGGC GATTCCTGGC CTTGTCTCCC TCGGACTCTG TGAAAATACC
GATTGCGCCC GTGAACAGAT CCGTGCCCTG CAGCAGACGC TCGAAAATGT GCCCATGGAG
GGAATGTCGG CAGCTGAGCG GCGCGATATG GTATTAGATA CTTTAGCAAG CACGGAGTTA
TCCGAGGCCG ATAAAGCACT CTTACGTGAT GAAATTATGG CGGGCAGCCT CTGGCCCGAG
GTGAAGGTGT TTGAAGTCAC CCTAGACTCC ACCAAGGGCT TAGCTAAAAA TTCAACCAAG
GATTTAGCTA AGGATCTAAG CACATTATCA CCGCCGCCAC AGCCAAGTCC GTCGCTCGCA
AATCTGTCGT CCGCTGGCAA GCTTGATGCC GTTCCCGTAT CTGAACCGCA AACCGATGGA
TTAGCCAACG CTCAAACCGA TAATCAAGTG ACAATGGAAA ACGCTCCCTC AGTTCCCGAC
ACCAACCTCA ATCCTTTGCA TCAAACCGAA AACCGCAACA GTGAAGCCGA TGATGAGAAA
GAGAGTGACA CCCGCAGTGT GCTGGCGTGG ATCAAAGGCT TTATGAGCGA TATGGGTTTA
GGTTTTGGCT GGGCCGCATT TTACTTCACT GTGTTTACCG CCAAATTTGA TGGTCAGACC
TTAGGTAAGA AACTCTTAGG CATCCGCGTT ATCCAACTCG ATGGCGCTAA AATCAGCCTT
TGGGGGGCAT TTGGCCGTTA TGGTGGTTAT GCGGCGGGCT TCACGACGGG CTTACTGGGC
TTTATGCAGA TATTTTGGGA TGCCAATCGG CAGGGGATCC AAGATAAAAT ATCTTCCACA
GTCGTGATAG ACTTAGCGCA AATGCATAAA AAGCAACAAT TAGAGCAGCA ACAGGCGCAG
GCTGAACATG CATTGGCCTA CGTGCCAACA CAGAATAATG CGACGTCTGC TCACCTTACA
ACAAGCACCC GTTCGGAGCA CCTATGA
 
Protein sequence
MKQQQTDLGK DPRTMVTPKA FTIAESVLYT PLATPLRRAL AMLIDGFFIT ILAEQMDWLF 
VLLVVGIIYI EKRSRQFGRV LKWGLYAAML GLMLFSSAGN LWNFHQSNQS TREKVSAPQD
INAVVKAIPG LVSLGLCENT DCAREQIRAL QQTLENVPME GMSAAERRDM VLDTLASTEL
SEADKALLRD EIMAGSLWPE VKVFEVTLDS TKGLAKNSTK DLAKDLSTLS PPPQPSPSLA
NLSSAGKLDA VPVSEPQTDG LANAQTDNQV TMENAPSVPD TNLNPLHQTE NRNSEADDEK
ESDTRSVLAW IKGFMSDMGL GFGWAAFYFT VFTAKFDGQT LGKKLLGIRV IQLDGAKISL
WGAFGRYGGY AAGFTTGLLG FMQIFWDANR QGIQDKISST VVIDLAQMHK KQQLEQQQAQ
AEHALAYVPT QNNATSAHLT TSTRSEHL