Gene Shewmr7_1539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1539 
Symbol 
ID4257780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1794477 
End bp1797212 
Gene Length2736 bp 
Protein Length911 aa 
Translation table11 
GC content52% 
IMG OID638122187 
Producthypothetical protein 
Protein accessionYP_737594 
Protein GI114047044 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.57335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0040034 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCAACA AGACGACACA CACACTGGCG AAGAAGGGCG TTAAGGCGAC ACCACGCCAC 
CTTTGGCCGA GCAACTCCCA CAGGAATAAA GCTCAAAGTA AGGCGAATTG GCTGATGCCA
ACTGGGGTCG CCCTACTGAT GGCTTTTAAT CTCACGGGTT GTTTTTCTGA CGATGATCCA
GCACCAGAGG TCGTCACGCC ACCCGTGGTT CAGCCCCCTG AAACAGGCCC CACCTTCCCC
GAAGGCGCCA TCAAAATCCT ACCGGGGGAT AATCTCACCA CCCGTATCCA AGAAGCCTTA
ATCAACGCGC AAAGTGGCGC TGTGATTGTG CTACCAAAGG GCACCTTTAA TATCGATTCG
ACATTACTGT TTGATGGCGA CGTGGATGGG GATGGCAGTT ATGCCAAAAA CGTCACTATC
ATGGGCTACG GGATGAAGGA CACTATCCTC AATTTCGCCC AAGCCAACTC GGGGGATGGG
ATTTTCGTGC AAAATGCGCT GAACATTACC ATTCAAGATC TGTCAGTCAA TGAAGCCAAA
AACAACGGCA TCAAGCTTAA AAATACCAAT GGCATCATAC TGCGCCGCGT GGGGGCGGTG
TGGGAAGGTG AGCTCGACAA AGATAACGGC GCCTATGGTC TGTATCCCGT TGAGTGTGAA
AACATTTTGA TTGAAGACAG CTATGTCCGC GGCAGTGCCG ATGCGGGCAT TTATGTGGGC
CAATCCCAAT ATATTGTGGT GCGCCGCAAT ATCGCCAAGG AAAACGTTGC GGGGATCGAA
GTCGAAAACT CTAAGTATGC CGATGTGTAT GACAACGAAG CCATGGGCAA CACTGGCGGG
ATTTTAGTGT TCGACTTGCC AATCAATAAC CACAGATACG GCTCTAGCGT GCGGATTTTC
AACAACAAAG TGTATGACAA CAACACGCCT AACTTCGCCA ACGCCTCGGC CAACCCCGCG
GGGGTGCATA TAGTGCCGCC GGGGACAGGG GTGATTGTGC TGTCGACCGC CGATGTGGAA
ATCTTCAATA ACGAAATTAC CCACCACGAT ACCTTAGGGG TGACTGTTAG TAGCTTCTTT
ATTGCAGAAC CCGATATGAC CTCCTTTGTC GGCAACTATG GTCAACCAGG TCAAGCCATT
GAAGATGGCT GGCGCCCTGT GCCGCGCAAT ATTTACTTGC ACGATAACGT GATCACTGAC
TATGGCAGCA AGCCTAAAGG CTATTTAATT CAAGATATTA TCCGCGCGTA TGTCATCAGT
CACGGCACCT TGCCCGGCGT GCTCTACGAC GGCTTAGGGG AAATGCTTGC CAATAACGGC
ACCGCCGCTT ACCTAGGTTT AAAAGAGGCA CCCTTTGCCA CAGATGGCAG CGATAACGTC
TGCGCCAGTG ATAACGGTGA TGTGTCCTAC GGCAGACTCT ATGCCAACAG CAACACCGAC
ATCAGCATCG CCGATGTGCA ATACGAGAAG ACCCAGAACA ACCTGCTGAA ATGTACCCAG
GTGAGCCTAC CCGTGCACAC TGTCACCTTC GCGGGCCAAG TGTTTGGCTG CGGGGTTGAC
GATAATACCG CGGGCTGTGA TGGCGGCGTG CTCGTTGGCG GCGGTGGTAC TATCGGTGAA
GGCGAAGGCG GTTTAGTGGG TGATGGTGAC CAAAGTCTTT GTCAGGCGAC GGGTTCAAAC
GTCAGTTGGG ATGCGCTGCT AAAAGCAAAC TGCCCTAAAC TGTCGGATTA CAATCTGTTC
AGCGATGCCA AAAACCCCAC GGCAGGGCCT AATTCGGGCG GTGTCCCTTA CGATCTTAAC
ACTCAGCTCT TTACCGACTA CGCCAGTAAA TACCGCTTTG TGTATTTGCC TTCGGGACAA
AAAGCCAGTT ACTCCGAAAA CGAAGCGTTT GATTTCCCAG TGGGTAGCGT TATCGTCAAA
ACTTTTGCCT TACCAAGCGA TACCAGTAAG CGCGGGATCA GTAACGAGAG TTTGATTGAA
ACCCGTTTGC TGATCCATCG TCCAACCGGT TGGAGCGCCC TGCCCTATGT ATGGAAGACC
GACAAGACAG ATGCGACGCT GGCGAAAGCC GGTGCAATTA GCAGCCAAAC CTTAAGCCAT
AAAGGAGAAA GCCTCACCTT TAACTACATG GTCCCGAGCA TGAACCAATG TAAGCAGTGT
CACCAGTTTA AGGCCGATGA CAACAGCAAC GCCGTGTTTG TGCCTATTGG TCCTAAGGCG
CGCCATTTAA ACCGCAATTA CAGCTATCAA GATGGCACCA TGAACCAACT GCTGAAATGG
GAAAGCCTAG GTATTTTGCA GGGATTACCT AACCTGAGCC AAGTACCACA AGTGCCCGCC
TACCACGATG GTGATGAAGC CACAGTCGCA AGCTTAAGCG ATACCGCATT AATGCAAACG
GCTAAAGGTT ATCTCGATAT CAACTGCGCC CATTGCCATA GACCCGAGGG CAACGCTTCT
AACACAGGCC TTAAACTCGA ATACTGGCGT GGCTACAGCG ATGATGCGGG TTTCTCCCAC
GGTACCTGTA AATCACCAGT CGCCTATGGC GGTGGAAACT TAGGTTTCGA CGTAGTCCCT
GGCAATGCCG CTGAGTCCAT CATGCACTTT AGAATGCAAA GCACGACCCC TGGCGATCGT
ATGCCTGAGA TTGGTCGCAG CCTATCCCAT GATGAAGGCG TGGCACTGAT CAGCGAATGG
ATTAAACGCC TGCCTGCGGC AAGCTGCTCG CACTAG
 
Protein sequence
MFNKTTHTLA KKGVKATPRH LWPSNSHRNK AQSKANWLMP TGVALLMAFN LTGCFSDDDP 
APEVVTPPVV QPPETGPTFP EGAIKILPGD NLTTRIQEAL INAQSGAVIV LPKGTFNIDS
TLLFDGDVDG DGSYAKNVTI MGYGMKDTIL NFAQANSGDG IFVQNALNIT IQDLSVNEAK
NNGIKLKNTN GIILRRVGAV WEGELDKDNG AYGLYPVECE NILIEDSYVR GSADAGIYVG
QSQYIVVRRN IAKENVAGIE VENSKYADVY DNEAMGNTGG ILVFDLPINN HRYGSSVRIF
NNKVYDNNTP NFANASANPA GVHIVPPGTG VIVLSTADVE IFNNEITHHD TLGVTVSSFF
IAEPDMTSFV GNYGQPGQAI EDGWRPVPRN IYLHDNVITD YGSKPKGYLI QDIIRAYVIS
HGTLPGVLYD GLGEMLANNG TAAYLGLKEA PFATDGSDNV CASDNGDVSY GRLYANSNTD
ISIADVQYEK TQNNLLKCTQ VSLPVHTVTF AGQVFGCGVD DNTAGCDGGV LVGGGGTIGE
GEGGLVGDGD QSLCQATGSN VSWDALLKAN CPKLSDYNLF SDAKNPTAGP NSGGVPYDLN
TQLFTDYASK YRFVYLPSGQ KASYSENEAF DFPVGSVIVK TFALPSDTSK RGISNESLIE
TRLLIHRPTG WSALPYVWKT DKTDATLAKA GAISSQTLSH KGESLTFNYM VPSMNQCKQC
HQFKADDNSN AVFVPIGPKA RHLNRNYSYQ DGTMNQLLKW ESLGILQGLP NLSQVPQVPA
YHDGDEATVA SLSDTALMQT AKGYLDINCA HCHRPEGNAS NTGLKLEYWR GYSDDAGFSH
GTCKSPVAYG GGNLGFDVVP GNAAESIMHF RMQSTTPGDR MPEIGRSLSH DEGVALISEW
IKRLPAASCS H