Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1539 |
Symbol | |
ID | 4257780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1794477 |
End bp | 1797212 |
Gene Length | 2736 bp |
Protein Length | 911 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638122187 |
Product | hypothetical protein |
Protein accession | YP_737594 |
Protein GI | 114047044 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.57335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0040034 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCAACA AGACGACACA CACACTGGCG AAGAAGGGCG TTAAGGCGAC ACCACGCCAC CTTTGGCCGA GCAACTCCCA CAGGAATAAA GCTCAAAGTA AGGCGAATTG GCTGATGCCA ACTGGGGTCG CCCTACTGAT GGCTTTTAAT CTCACGGGTT GTTTTTCTGA CGATGATCCA GCACCAGAGG TCGTCACGCC ACCCGTGGTT CAGCCCCCTG AAACAGGCCC CACCTTCCCC GAAGGCGCCA TCAAAATCCT ACCGGGGGAT AATCTCACCA CCCGTATCCA AGAAGCCTTA ATCAACGCGC AAAGTGGCGC TGTGATTGTG CTACCAAAGG GCACCTTTAA TATCGATTCG ACATTACTGT TTGATGGCGA CGTGGATGGG GATGGCAGTT ATGCCAAAAA CGTCACTATC ATGGGCTACG GGATGAAGGA CACTATCCTC AATTTCGCCC AAGCCAACTC GGGGGATGGG ATTTTCGTGC AAAATGCGCT GAACATTACC ATTCAAGATC TGTCAGTCAA TGAAGCCAAA AACAACGGCA TCAAGCTTAA AAATACCAAT GGCATCATAC TGCGCCGCGT GGGGGCGGTG TGGGAAGGTG AGCTCGACAA AGATAACGGC GCCTATGGTC TGTATCCCGT TGAGTGTGAA AACATTTTGA TTGAAGACAG CTATGTCCGC GGCAGTGCCG ATGCGGGCAT TTATGTGGGC CAATCCCAAT ATATTGTGGT GCGCCGCAAT ATCGCCAAGG AAAACGTTGC GGGGATCGAA GTCGAAAACT CTAAGTATGC CGATGTGTAT GACAACGAAG CCATGGGCAA CACTGGCGGG ATTTTAGTGT TCGACTTGCC AATCAATAAC CACAGATACG GCTCTAGCGT GCGGATTTTC AACAACAAAG TGTATGACAA CAACACGCCT AACTTCGCCA ACGCCTCGGC CAACCCCGCG GGGGTGCATA TAGTGCCGCC GGGGACAGGG GTGATTGTGC TGTCGACCGC CGATGTGGAA ATCTTCAATA ACGAAATTAC CCACCACGAT ACCTTAGGGG TGACTGTTAG TAGCTTCTTT ATTGCAGAAC CCGATATGAC CTCCTTTGTC GGCAACTATG GTCAACCAGG TCAAGCCATT GAAGATGGCT GGCGCCCTGT GCCGCGCAAT ATTTACTTGC ACGATAACGT GATCACTGAC TATGGCAGCA AGCCTAAAGG CTATTTAATT CAAGATATTA TCCGCGCGTA TGTCATCAGT CACGGCACCT TGCCCGGCGT GCTCTACGAC GGCTTAGGGG AAATGCTTGC CAATAACGGC ACCGCCGCTT ACCTAGGTTT AAAAGAGGCA CCCTTTGCCA CAGATGGCAG CGATAACGTC TGCGCCAGTG ATAACGGTGA TGTGTCCTAC GGCAGACTCT ATGCCAACAG CAACACCGAC ATCAGCATCG CCGATGTGCA ATACGAGAAG ACCCAGAACA ACCTGCTGAA ATGTACCCAG GTGAGCCTAC CCGTGCACAC TGTCACCTTC GCGGGCCAAG TGTTTGGCTG CGGGGTTGAC GATAATACCG CGGGCTGTGA TGGCGGCGTG CTCGTTGGCG GCGGTGGTAC TATCGGTGAA GGCGAAGGCG GTTTAGTGGG TGATGGTGAC CAAAGTCTTT GTCAGGCGAC GGGTTCAAAC GTCAGTTGGG ATGCGCTGCT AAAAGCAAAC TGCCCTAAAC TGTCGGATTA CAATCTGTTC AGCGATGCCA AAAACCCCAC GGCAGGGCCT AATTCGGGCG GTGTCCCTTA CGATCTTAAC ACTCAGCTCT TTACCGACTA CGCCAGTAAA TACCGCTTTG TGTATTTGCC TTCGGGACAA AAAGCCAGTT ACTCCGAAAA CGAAGCGTTT GATTTCCCAG TGGGTAGCGT TATCGTCAAA ACTTTTGCCT TACCAAGCGA TACCAGTAAG CGCGGGATCA GTAACGAGAG TTTGATTGAA ACCCGTTTGC TGATCCATCG TCCAACCGGT TGGAGCGCCC TGCCCTATGT ATGGAAGACC GACAAGACAG ATGCGACGCT GGCGAAAGCC GGTGCAATTA GCAGCCAAAC CTTAAGCCAT AAAGGAGAAA GCCTCACCTT TAACTACATG GTCCCGAGCA TGAACCAATG TAAGCAGTGT CACCAGTTTA AGGCCGATGA CAACAGCAAC GCCGTGTTTG TGCCTATTGG TCCTAAGGCG CGCCATTTAA ACCGCAATTA CAGCTATCAA GATGGCACCA TGAACCAACT GCTGAAATGG GAAAGCCTAG GTATTTTGCA GGGATTACCT AACCTGAGCC AAGTACCACA AGTGCCCGCC TACCACGATG GTGATGAAGC CACAGTCGCA AGCTTAAGCG ATACCGCATT AATGCAAACG GCTAAAGGTT ATCTCGATAT CAACTGCGCC CATTGCCATA GACCCGAGGG CAACGCTTCT AACACAGGCC TTAAACTCGA ATACTGGCGT GGCTACAGCG ATGATGCGGG TTTCTCCCAC GGTACCTGTA AATCACCAGT CGCCTATGGC GGTGGAAACT TAGGTTTCGA CGTAGTCCCT GGCAATGCCG CTGAGTCCAT CATGCACTTT AGAATGCAAA GCACGACCCC TGGCGATCGT ATGCCTGAGA TTGGTCGCAG CCTATCCCAT GATGAAGGCG TGGCACTGAT CAGCGAATGG ATTAAACGCC TGCCTGCGGC AAGCTGCTCG CACTAG
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Protein sequence | MFNKTTHTLA KKGVKATPRH LWPSNSHRNK AQSKANWLMP TGVALLMAFN LTGCFSDDDP APEVVTPPVV QPPETGPTFP EGAIKILPGD NLTTRIQEAL INAQSGAVIV LPKGTFNIDS TLLFDGDVDG DGSYAKNVTI MGYGMKDTIL NFAQANSGDG IFVQNALNIT IQDLSVNEAK NNGIKLKNTN GIILRRVGAV WEGELDKDNG AYGLYPVECE NILIEDSYVR GSADAGIYVG QSQYIVVRRN IAKENVAGIE VENSKYADVY DNEAMGNTGG ILVFDLPINN HRYGSSVRIF NNKVYDNNTP NFANASANPA GVHIVPPGTG VIVLSTADVE IFNNEITHHD TLGVTVSSFF IAEPDMTSFV GNYGQPGQAI EDGWRPVPRN IYLHDNVITD YGSKPKGYLI QDIIRAYVIS HGTLPGVLYD GLGEMLANNG TAAYLGLKEA PFATDGSDNV CASDNGDVSY GRLYANSNTD ISIADVQYEK TQNNLLKCTQ VSLPVHTVTF AGQVFGCGVD DNTAGCDGGV LVGGGGTIGE GEGGLVGDGD QSLCQATGSN VSWDALLKAN CPKLSDYNLF SDAKNPTAGP NSGGVPYDLN TQLFTDYASK YRFVYLPSGQ KASYSENEAF DFPVGSVIVK TFALPSDTSK RGISNESLIE TRLLIHRPTG WSALPYVWKT DKTDATLAKA GAISSQTLSH KGESLTFNYM VPSMNQCKQC HQFKADDNSN AVFVPIGPKA RHLNRNYSYQ DGTMNQLLKW ESLGILQGLP NLSQVPQVPA YHDGDEATVA SLSDTALMQT AKGYLDINCA HCHRPEGNAS NTGLKLEYWR GYSDDAGFSH GTCKSPVAYG GGNLGFDVVP GNAAESIMHF RMQSTTPGDR MPEIGRSLSH DEGVALISEW IKRLPAASCS H
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