Gene Shewmr7_1480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1480 
Symbol 
ID4257757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1723428 
End bp1724372 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content48% 
IMG OID638122129 
ProductN5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 
Protein accessionYP_737536 
Protein GI114046986 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03533] protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.760634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.328142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATAAGA TCTTTGTAGA TGAAGCTGTG ACAGAGTTAC GCACCATAGG TGACATGTTG 
CGTTGGGCGG TGAGCCGCTT TAATGATGCC AATGTGTACT ATGGCCACGG GACCGATAAC
GCGTGGGATG AGGCTATCGC CTTAGTGTTT CATGCGCTGC ACTTGCCCGA AGAAATCGGC
CAACAGGTGA TTTTAAGTAA CTTAACCAGC AGCGAAAAAC ACAAAATCGT CGAGCTGATC
ATTCGCCGCG TACGTGAACG TTTGCCTGTG CCTTATTTAA CCAATAAAGC GCGCTTCGCA
GGGCTTGAGT TTTATGTGGA TGAGCGTGTG TTAGTGCCTC GTTCACCGAT CGCAGAGATG
ATTGCCAATC GCTTTAGTCC TTGGTTATAC GGCAAACCCG TTAATCGTAT TTTAGATTTA
TGTACTGGCA GTGGTTGTAT CGCGATTGCC TGTGCCTACG AATTTGATGA GGCCGAGGTC
GATGCGCTGG ATATCAGTGA AGACGCCCTC GATGTGGCGC AAATCAACGT TGAAACCTTA
GGGGTGATGG ACAGAGTTTT CCCGATGCAA TCGGATCTGT TTTCAGCCAT TCCTGAAGGT
CCACAATATG ATTTGATTGT CTCTAATCCG CCCTATGTGG ATGAAGAAGA TATCGGCGAT
ATGCCAGATG AATACCACCA TGAGCCTGCG ATTGGTTTAG CCTCGGGTCG TGACGGCCTC
GATTTAACCA AACGTATTTT AGCGAATGCA GCCCAATACC TGACACCAAC AGGGATTTTA
GTGGTTGAGG TGGGTAACTC TATGGTGCAT CTGATGGAAC AATTCCCTGA AGTGCCTTTC
ACTTGGGTGA GTTTTGAACA CGGCGGTGAC GGTGTGTTTG TGCTGACTCG CGATCAACTG
GTCGAACATC AATCGCTTTT TGCTATTTAT CGCGACGCGC AATAA
 
Protein sequence
MDKIFVDEAV TELRTIGDML RWAVSRFNDA NVYYGHGTDN AWDEAIALVF HALHLPEEIG 
QQVILSNLTS SEKHKIVELI IRRVRERLPV PYLTNKARFA GLEFYVDERV LVPRSPIAEM
IANRFSPWLY GKPVNRILDL CTGSGCIAIA CAYEFDEAEV DALDISEDAL DVAQINVETL
GVMDRVFPMQ SDLFSAIPEG PQYDLIVSNP PYVDEEDIGD MPDEYHHEPA IGLASGRDGL
DLTKRILANA AQYLTPTGIL VVEVGNSMVH LMEQFPEVPF TWVSFEHGGD GVFVLTRDQL
VEHQSLFAIY RDAQ