| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1472 |
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| Symbol | fadI |
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| ID | 4255634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1709861 |
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| End bp | 1711171 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638122121 |
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| Product | 3-ketoacyl-CoA thiolase |
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| Protein accession | YP_737528 |
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| Protein GI | 114046978 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02446] fatty oxidation complex, beta subunit FadI |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.367131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00889683 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGATA GACAACAGGT AACTAACGCA AAGGGTGAGC GTATCGCCAT TGTGGCGGGC
TTAAGAACGC CATTTGCGAA ACAGGCGACC GCATTCCACG GTGTGTCGGC GCTCGATATG
GGCAAAATGG TGGTTAACGA ACTGCTGGCC CGTAGCGAAC TGGACCCTAA GTTGATTGAG
CAGTTGGTGT ACGGTCAGGT GGTACAAATG CCTGCGGCAC CGAACATTGC CCGTGAAATC
GTGTTAGGAA CGGGCATGGA TGTGTCAACC GATGCCTACA GTGTGACCCG CGCCTGTGCG
ACCAGTTTTC AATCTGCGGT GAATGTGGCT GAGTCAATCA TGACGGGCAA TATCGAGATT
GGTATTGCCG GCGGTGCCGA CTCTTCTTCT GTATTACCTA TTGGTGTGTC TAAAAAACTC
GCCCATGCCT TAGTCGATCT GAATAAAGCC CGCAGCTTTG GCCAAAAGTT ACAAATTTTC
CGCCGTTTAG GCATTAAAGA TTTACTGCCT GTGCCGCCTG CCGTTGCCGA GTATTCTACG
GGATTGTCTA TGGGACAAAC CGCGGAGCAA ATGGCCAAGA CCTATAATAT CAGCCGCGCC
GACCAAGATG CATTGGCGCA CCGCTCCCAC ACGTTGGCGA GTGAAACTTG GGCTTCAGGT
CACCTACGTG ACGAAGTGAT GGTGGCCCAT GTTCCCCCTT ACAAACAGTT TATCGAGCGC
GATAATAACA TTCGTGAAAA CTCCGATTTA AGCTCTTACG CTAAACTGCG TCCCGCTTTC
GATAAAAAGC ATGGCAGCGT GACGGCCGCT AACAGTACGC CGCTAACCGA TGGCGCCTCG
GCGATCATTT TGATGAGCGA AGGCCGTGCT AAAGCCTTGG GTTATCAACC TATTGGTTAC
ATTAAGAGCT ACGCATTTAC CGCGATTGAT GTCTGGCAAG ACATGCTGAT GGGGCCATCC
TATGCAACGC CATTGGCATT AAAGCGCGCC GGCATGGAAT TAGAAGATTT AACTCTTATC
GAAATGCATG AAGCTTTCGC GGCACAAACC TTAGCCAACA TGCAGATGTT TGCCTCAAAG
AAATTTGCCG AAGAAAAATT AGGGCGTAAT CGTGCCATTG GTGAAATCGA TATGAGCAAA
TTTAACGTGC TCGGTGGCTC TTTAGCTTAC GGTCATCCAT TTGCGGCCAC AGGTACACGT
TTAATCACTC AGGTTTGCCG TGAGCTTAAG CGTCGTGGCG GCGGAACGGG TCTGGCAACG
GCCTGTGCTG CGGGTGGCTT AGGGGCTGCA ATGATTGTGG AAGTGGAGTA A
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| Protein sequence | MSDRQQVTNA KGERIAIVAG LRTPFAKQAT AFHGVSALDM GKMVVNELLA RSELDPKLIE
QLVYGQVVQM PAAPNIAREI VLGTGMDVST DAYSVTRACA TSFQSAVNVA ESIMTGNIEI
GIAGGADSSS VLPIGVSKKL AHALVDLNKA RSFGQKLQIF RRLGIKDLLP VPPAVAEYST
GLSMGQTAEQ MAKTYNISRA DQDALAHRSH TLASETWASG HLRDEVMVAH VPPYKQFIER
DNNIRENSDL SSYAKLRPAF DKKHGSVTAA NSTPLTDGAS AIILMSEGRA KALGYQPIGY
IKSYAFTAID VWQDMLMGPS YATPLALKRA GMELEDLTLI EMHEAFAAQT LANMQMFASK
KFAEEKLGRN RAIGEIDMSK FNVLGGSLAY GHPFAATGTR LITQVCRELK RRGGGTGLAT
ACAAGGLGAA MIVEVE
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