Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1466 |
Symbol | |
ID | 4255628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1702205 |
End bp | 1703866 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638122115 |
Product | hypothetical protein |
Protein accession | YP_737522 |
Protein GI | 114046972 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.661911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00237644 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGTGATCA GACAATTTTT TATCCTCCTC ACGCTTTGCA TCGCGGTCAT TCAACCCGCC TTTGCCCTGA GCAAACTCGA GGCGTCGGTC GATCGCAATC CGGTGATGGA GGGAGAGTAC TTTGTGCTCA ATGTCAGTGC CGACGATGAG GTCGACACGG GTAAACTCGA TACCTCTATC CTGCTCAAGG ATTTCATCGT GGGTCGCACC AGCGTGAGTC GCAGCACCCA GATAATGAAC TTCGATGCGG TTAAAGAGAC CCGCTGGCAA GTGCTGCTTG CCCCAAAGCA AAAGGGCCAA CTGACCATTC CATCCTTTAG CATTGATGGC GTCAGCTCCG CCGAAATTCC CCTCAAGGTA GTCGAAGCGG GCGCACAACC AGAGCAAGCC AAGAATCTGT TTATCGATGC CAAAGTCTCG ACCGATGAGG CCTACGTCGG CCAGCTTATT ACCTATAAAG TAAAGCTTTA TCTTGCGGTC GAACTGCAAC GCGGCGTGCT CAATGCCCCG GTTATCGAAG GCGCGCAGAT TAAACAAATC GGCGAAGATA AGGACGGCTC AGAGATCATC GAAGGCCGTC GTTACCGCGT GATTGAGCGC ACCTATGGCA TCATTCCCGA CTTACCCGGC CAAGTGAACA TCAAAGGTGC GACCTTTTCT GGCGATGTAT TAGTGGAATC CCAACGCCGT GGCGGCATGT TTGGCTTTAA CGAGAGCCGC CCAATGCAGG CTGGCGCGCC CTCCTTAAGC ATTCAAGTCG AACCTGCGCC AACGAGCTTC CAAGGCCAAT GGCTTGTGGC CGATTTAGTG GCCTTAAAAG AAAGTTTTCC TGAGGATGTA AAAGAGTTTA CCGTCGGTAG TCCCATCACC CGCACGCTCA CCTTATTGGC CTCCAATGCC GATGAGAATA GCCTGCCGGA TATCGCGCAA AACCTGCCGC CTGAGCTCAA ATCCTATCCC GAAAAACCCC AGCGCCAGAG CTTTGTGCGC GACGCGCAGA TAGTGTCCCA ATACAGTATT ACCTCGGCTA TAGTCCCCAG TAAGGCAGGC ACTTTTACCT TACCCGAAGT GAAATTACCT TGGTGGAATC CACATCTTAA ACGCCAAGAA ATGGCAACCC TGCCCGCCCG CACGATTCAA GTAAAAGGTG GCGCCGTGGT CGATACCCCC ATCGAACCCA ACTGGCAGGC AAATACCAGC ACGAACAGTG AAAGTCATTG GAGCGCGAAT CTGTTCGCCC TGCTGTGGCT GGTGACATTA GTTGCTTGGG CCGTCACTTT TGTCGCTTGG CGACGTGCGC TGAAACGCCA ATCAACAGTC AATACACCAG TAACAGCGCA ACCGCTCGTT CTTCGCAATG GCCTAAAGGG TTTAGAGCAA GCCTGCGCTA AAGGCAATGT CAGTGATATT TTGCAGCAAT TGCAGCAATA CTATAGTGAA CAGGCCGCTC GCCCTATGAC GCTTGATAAA ATTGCCGCGC AGTCGAGCGA GTTAGCTGAG GCGATTCGTC AGTTGCAAGC CTTAGCCTAC GGTGGTAAAG CCAATAGCGA TACCCAACTG GCTGTCGCGG TAAAAGCATT GTTAAGCGCG GTGAAAAGCG GCAAGTTACA CCCCATGGCG CAGCAATCCA CGCCATTACG CCCGCTAAAT CCAAACGGCT AA
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Protein sequence | MVIRQFFILL TLCIAVIQPA FALSKLEASV DRNPVMEGEY FVLNVSADDE VDTGKLDTSI LLKDFIVGRT SVSRSTQIMN FDAVKETRWQ VLLAPKQKGQ LTIPSFSIDG VSSAEIPLKV VEAGAQPEQA KNLFIDAKVS TDEAYVGQLI TYKVKLYLAV ELQRGVLNAP VIEGAQIKQI GEDKDGSEII EGRRYRVIER TYGIIPDLPG QVNIKGATFS GDVLVESQRR GGMFGFNESR PMQAGAPSLS IQVEPAPTSF QGQWLVADLV ALKESFPEDV KEFTVGSPIT RTLTLLASNA DENSLPDIAQ NLPPELKSYP EKPQRQSFVR DAQIVSQYSI TSAIVPSKAG TFTLPEVKLP WWNPHLKRQE MATLPARTIQ VKGGAVVDTP IEPNWQANTS TNSESHWSAN LFALLWLVTL VAWAVTFVAW RRALKRQSTV NTPVTAQPLV LRNGLKGLEQ ACAKGNVSDI LQQLQQYYSE QAARPMTLDK IAAQSSELAE AIRQLQALAY GGKANSDTQL AVAVKALLSA VKSGKLHPMA QQSTPLRPLN PNG
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