Gene Shewmr7_1460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1460 
Symbol 
ID4255622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1696260 
End bp1696976 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content48% 
IMG OID638122109 
Producthypothetical protein 
Protein accessionYP_737516 
Protein GI114046966 
COG category[S] Function unknown 
COG ID[COG2859] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000634241 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000276255 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCAACGCA ATTATCTTCT TCCCGCCCTC GTGCTTGGCG GTTTCTTATG TGCAGGCATG 
GTCTATGTAG GACAAAGCGC CAGCTCGGCG CTGTTAGAGA TGAAAGCCCT AGAGCGCACA
GTCACAGTTA AAGGGCTGGC CGAAAAGGAG GTGAAAGCCA ATATCGCCAT CTGGCCGATT
AACTTCACCG AAGTCGACAA TAACCTGCCT AAGCTCTACG ACACAGTGCA GCAAAAAACC
GACAGAGTGG TCGCCTACCT CAAGGAACAG GGTTTTAGCG ACAGCGAAAT TACAGTATCC
CTGCCGACAA TAGAAGACAG ACAGGCTCAA GGCTACGTTG ACCCAAATGT GCGCTATCGT
TACTCGGCAA AGGTGAATCT TTCTGTCTAT ACCCCACAAA TTGATTTAAT GCTCAGCACG
CGTAAGCAAA TGATAAATCT AGTTAAAGAA GGCATAGCCA TCGGTAGCCA AGATTATGAA
AACCGTACCG AGTTTTTATT TACGGCACTC AATGATGTGA AACCGACCAT GGTGCAGGAA
GCGACGCAAA ATGCGCGGGA AGTGGCTGAA AAGTTTGCCA AGGACTCACA ATCGCGTCTG
GGTAAGATTA AGAGTGCCAG CCAAGGCCAG TTTACGATTT CCGATCGTGA CAGCAGCACG
CCTTACATAA AACAAATTCG CATTGTGTCT ACGCTGACCT ACTATTTAAA CGACTGA
 
Protein sequence
MQRNYLLPAL VLGGFLCAGM VYVGQSASSA LLEMKALERT VTVKGLAEKE VKANIAIWPI 
NFTEVDNNLP KLYDTVQQKT DRVVAYLKEQ GFSDSEITVS LPTIEDRQAQ GYVDPNVRYR
YSAKVNLSVY TPQIDLMLST RKQMINLVKE GIAIGSQDYE NRTEFLFTAL NDVKPTMVQE
ATQNAREVAE KFAKDSQSRL GKIKSASQGQ FTISDRDSST PYIKQIRIVS TLTYYLND