Gene Shewmr7_1447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1447 
Symboltgt 
ID4256348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1680953 
End bp1682077 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content48% 
IMG OID638122096 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_737503 
Protein GI114046953 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000328041 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0357414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTG AACTCGACAC TACCGACGGC CGTGCGCGCC GTGGTCGCTT GATTTTTGAA 
CGCGGCACGG TGGAAACCCC AGCCTTTATG CCTGTTGGTA CTTACGGCAC GGTAAAAGGC
ATGACGCCTG AAGAAGTGCG TGCTACTGGC GCAGACATTC TGCTCGGTAA CACTTTCCAC
CTGTGGTTAC GTCCCGGCGA AGAAATCATG CGTAAGCATG GTGACTTGCA CGATTTTATG
AACTGGCAGC GTCCTATTCT GACCGATTCG GGCGGTTTCC AAGTGTTCAG TTTGGGTGAC
ATTCGTAAAA TTACCGAAGA AGGTGTGCAT TTCCGTTCGC CAATCAACGG CGAGAAAATC
TTCTTAGATC CTGAAAAATC AATGCAAATT CAACATGCAT TGGGCAGTGA TGTGGTAATG
ATTTTTGACG AATGTACTCC ATATCCGGCA ACTGAAGATG AAGCGCGCAA GTCAATGCAG
ATGTCACTGC GTTGGGCTAA GCGTTCACGC GACGAGTTCG ACCGTCTGGA AAACCCCAAT
TCATTATTCG GGATCATCCA AGGCAGTGTT TATGAAGATT TACGCGACGA GAGCTTAAAA
GGCTTAGTCG AAATTGGTTT CGACGGTTAT GCCGTCGGTG GTTTGGCCGT AGGTGAGCCT
AAGGAAGACA TGCACCGCAT TCTTGAGCAT GTCTGTCCAC AAATTCCTGC GGACAAACCT
CGCTATCTGA TGGGGGTCGG TAAGCCAGAG GATTTAGTTG AAGGTGTGCG TCGTGGTATC
GACATGTTTG ACTGTGTGAT GCCAACCCGT AACGCCCGCA ACGGTCATCT GTTTACCAGT
GAAGGTGTGA TTAAGATCCG CAATGCGCGT CATCGTGATG ACACTTCACC GCTCGATCCT
AAGTGTGATT GTTATACCTG TAAAAACTAT TCACGGGCAT ACCTTTACCA TTTAGATCGT
TGTAATGAGA TTCTGGGTGC GCGTTTAAAC ACCATTCACA ACTTGAGATA CTATCAAATG
TTAATGGAAG GTTTGCGCGG GGCGATTGAG ACGGGTACAT TAGACGCCTT TGTAAAGGAC
TTCTATACCA GTCAAGGTCG TGAAGTACCA GAGTTAGTCG ATTGA
 
Protein sequence
MKFELDTTDG RARRGRLIFE RGTVETPAFM PVGTYGTVKG MTPEEVRATG ADILLGNTFH 
LWLRPGEEIM RKHGDLHDFM NWQRPILTDS GGFQVFSLGD IRKITEEGVH FRSPINGEKI
FLDPEKSMQI QHALGSDVVM IFDECTPYPA TEDEARKSMQ MSLRWAKRSR DEFDRLENPN
SLFGIIQGSV YEDLRDESLK GLVEIGFDGY AVGGLAVGEP KEDMHRILEH VCPQIPADKP
RYLMGVGKPE DLVEGVRRGI DMFDCVMPTR NARNGHLFTS EGVIKIRNAR HRDDTSPLDP
KCDCYTCKNY SRAYLYHLDR CNEILGARLN TIHNLRYYQM LMEGLRGAIE TGTLDAFVKD
FYTSQGREVP ELVD