Gene Shewmr7_1432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1432 
Symbol 
ID4258548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1666089 
End bp1667717 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content52% 
IMG OID638122081 
ProductDNA-3-methyladenine glycosylase II / transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase 
Protein accessionYP_737488 
Protein GI114046938 
COG category[F] Nucleotide transport and metabolism
[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[COG2169] Adenosine deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.587102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGA CAAGCGTGAG CCTAAATTCA GCCCCAAAAC CGCCATTCGA GCAGACATCA 
AGCGATGCGC AGGATTGCCA AATATCCGCT GGGATTTGCC GTGAAGCGCG CATGAGCCGC
GATCCACGTT TTGACGGTAA GTTCTTTGTG GGCGTGTTAA GTACGGGGAT TTATTGCCGA
ACAGTGTGTC CTGCAGTCGC GCCGAAGGAA GAAAATGTTC GTTATTTTGA CTCGGCCATT
AAAGCTGCGC AGGCGGGACT TAGACCTTGT CTGCGTTGCC GCCCCGACAG TGCTCCTGGC
TCTAATCCGT GGAAAGGTAC TAACACAACC CTAGACAGAG CGATAGGTTT GATTGAAGCT
GGCGCCTTAT CTGGCGAGCA TGGATTAACG GTCGAGGCCT TGGCAGACAA ACTGGGGATC
AGCAGCCGTT ATTTAAATAA GTTATTTACC GCAGGATTTG GCACTTCACC TAAACAATTT
GCCCTCTATC GTCAGTTATT GTTCGCAAAA CAGTTATTGC ATCAAACGCA GTTGCCCATC
ACTCAGGTCG CCCTTGCCGC AGGTTTTAAC AGTATTCGTC GTTTCAACGA GGCGTTTCAG
CAGGCGCTGC AACTAACGCC CACGCAGTTA CGAAAATCGA GCCTGAAATC GACGACGAAA
ATAGACGACG GGGAGAGTGT CGAACTCGCT TGTTCGCAGG AGATGCCAGC GCACAGCTTG
AGTCTGTATC AGTACTACCG ACCGCCACTC GATTGGTCGG CGCAATTAGC CTTTTATCGC
CTGCGCGCCG TCGCTGGTAT GGAATGGTTC AGTGACAGTG CCGCCCCTCA CTCCCATGGG
GCGATTAACC CAAATATGCC ACTTGAGTAT GGCCGCACTC TGCAACTTGA GGATATCCGC
GCTGTGGTGC ATATCGTCCA TGAGGCGCCT TTGCATCGCT TTAAAATCAC GCTGACGTTA
ACGCCCGACT CGCCCTTATC GGGTCTACAA AAGCTCATCA CCCAAGTGCG GCGCATTTTA
GATCTCGATG CCGACATGCA GCAGATTGAA CACAATTTAG AGCACTTGAC TGATCTAAAA
CTCAGTAGCA AATCCGGGCT TAGGATCCCG GGCGCTGGCA CTGTGTTTGA GGCGGGTTGC
CGAGCGGTCT TAGGCCAGCA GGTGAGCGTA GTGCAGGCCA CTAAATTACT GAATATATTG
GTCGAAGCCT ATGGCGAGCG CTTTAGTTTA AACGGGCGGG AATATCGACT ATTCCCCACG
CCGCAGGCGA TTCGTGAGGC GAGTCTCGAT GAGCTTAAAA TGCCCGGTGC GCGCAAATTG
GCGCTCAATG CGCTTGCGGC GTTTATCTGT GAGCAGCCCG AAGCCTCAGT CGATGAGTGG
ATTGGGGTAA AAGGCATCGG CCCTTGGACC ATTGCCTACG CCAAATTACG TGGACTTGGC
GATCCGAATA TCTTCTTGCA CACAGATTTA ATTGTTAAAA AACAATTGTT AGCCAGTGTA
GCCGCGCAAA AAGGCGTGGA TATTGAAGCG GTAAAACAGC TGGATTATAC AACGCTTGCA
CAGCGGGTGA GTGCGGATAT CGCCCCTTGG GGGAGTTATT TAACCTTTCA GCTGTGGTCC
AATGCATAA
 
Protein sequence
MKQTSVSLNS APKPPFEQTS SDAQDCQISA GICREARMSR DPRFDGKFFV GVLSTGIYCR 
TVCPAVAPKE ENVRYFDSAI KAAQAGLRPC LRCRPDSAPG SNPWKGTNTT LDRAIGLIEA
GALSGEHGLT VEALADKLGI SSRYLNKLFT AGFGTSPKQF ALYRQLLFAK QLLHQTQLPI
TQVALAAGFN SIRRFNEAFQ QALQLTPTQL RKSSLKSTTK IDDGESVELA CSQEMPAHSL
SLYQYYRPPL DWSAQLAFYR LRAVAGMEWF SDSAAPHSHG AINPNMPLEY GRTLQLEDIR
AVVHIVHEAP LHRFKITLTL TPDSPLSGLQ KLITQVRRIL DLDADMQQIE HNLEHLTDLK
LSSKSGLRIP GAGTVFEAGC RAVLGQQVSV VQATKLLNIL VEAYGERFSL NGREYRLFPT
PQAIREASLD ELKMPGARKL ALNALAAFIC EQPEASVDEW IGVKGIGPWT IAYAKLRGLG
DPNIFLHTDL IVKKQLLASV AAQKGVDIEA VKQLDYTTLA QRVSADIAPW GSYLTFQLWS
NA