| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1427 |
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| Symbol | |
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| ID | 4258543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1656747 |
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| End bp | 1657391 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638122061 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_737483 |
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| Protein GI | 114046933 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000465338 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.728772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATATCGC GAATTTTTGG TTACTTTGAA GAAGGGGTGC TTAACCTCTT GATCACCTTA
ATGACACTCT TAGTGTTCAC TGAGGTCGTG GCGCGGTTTT TCTTCAATAC CGGTTTTTTA
TGGATCCAAG AACTGACCTT AACCCTCTGT GGTTGGTTTG TACTCTTTGG TATGTCCTAT
GGGGTGAAAG TCGGTGCTCA CATCGGTGTT GATGCGTTTG TAAAAAATCT GCCCCCTAAG
GCTAAAAAGG TCACTTCCCT AGTGACGGCA TTGATTTGCT TGGCTTATTG CGGACTGTTT
TTAAAAGGTA GCTGGTCATA TCTGTCACAG ATGTACCAAA TCGGCGTACC AATGGAAGAT
ATTCACTTTC CTAAGTTCCT GTTAAACAGC TTAGATCCGG ACTTTGCTTG GAACACCTTA
AAGATTGATG TCGAGGACGG CGCAGTGCCC ATTTGGTTAT CCCAAAGCAT TCTATTGATT
GGTTTTAGCA TGTTGACTTG GCGTTTCTTA GAACTGTTTA TCGCCATTCT GCGCAACCAA
GTCTCTGGAT TCCAATTTGC CGATGAAGCG AAAGAAAGCA TGCATTTAAT TGATGAAGCT
GCTCAGCACG CACAACAAGA AACAGACAAC AAGGAAGCGA AGTAA
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| Protein sequence | MISRIFGYFE EGVLNLLITL MTLLVFTEVV ARFFFNTGFL WIQELTLTLC GWFVLFGMSY
GVKVGAHIGV DAFVKNLPPK AKKVTSLVTA LICLAYCGLF LKGSWSYLSQ MYQIGVPMED
IHFPKFLLNS LDPDFAWNTL KIDVEDGAVP IWLSQSILLI GFSMLTWRFL ELFIAILRNQ
VSGFQFADEA KESMHLIDEA AQHAQQETDN KEAK
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